Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05766 ATGAGAACCCAACGCTCTCACCATTTCCTCCTATTATCCATCCTCTTCTTCGCATCAACATTCTCATTTCTCCGATTAGCAACCGCCACCGGAGCAGAACCTCCGACCACCGGCAACAACGACGCCGAATACATCCGTTCAAGTTGCAACGCAACATTATACCCTGACATATGCTACACTTCCCTATCTCGTTACGCCAATGCAGTTCAACAGAATCCAGGCCAACTCGCTCGCATCGCCATAGCCGTAAGTTTCTCCAAGGTTCACCGTACCGCATCATACCTCTCAAATCTCACTCGCGTCGCCGATTACAGCGGTAACTCACGCGCCGCACTCGCTCTCCATGATTGTTTCTCAAATCTCGACGACGCCGTTGATGAAATCCGTGGCTCGCTTAAACAGATGCGTCAGTTAGGAGCCGCCGGAAGTGGAACCGATTCGTTTCTTTTTCAGATGAGTAACGTCCAGACGTGGATGAGTGCGGCTCTTACCGACGAAGAAACGTGTACGGATGGATTTCAAGATGTAGAGGATTGTCCGATGAAAGCGGATGTAGAGAATCGTGTGACGAAGGTGAAGAAATTCACGAGTAATGCTTTGGCACTTGTTAATGGTTACGCCAAAAAAGGAATGCCGTGA 639 0.4945 MRTQRSHHFLLLSILFFASTFSFLRLATATGAEPPTTGNNDAEYIRSSCNATLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYSGNSRAALALHDCFSNLDDAVDEIRGSLKQMRQLGAAGSGTDSFLFQMSNVQTWMSAALTDEETCTDGFQDVEDCPMKADVENRVTKVKKFTSNALALVNGYAKKGMP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05766 212 NCBIfam pectinesterase inhibitor domain 13 206 IPR006501 GO:0004857
Trre8g05766 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 204 IPR035513 -
Trre8g05766 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 206 IPR035513 -
Trre8g05766 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 202 - -
Trre8g05766 212 CDD PMEI-like_3 47 208 - -
Trre8g05766 212 SMART PMEI_2 40 202 IPR006501 GO:0004857
Trre8g05766 212 Pfam Plant invertase/pectin methylesterase inhibitor 44 202 IPR006501 GO:0004857
Trre8g05766 212 FunFam Pectin methylesterase inhibitor 1 40 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05766 Trre-Chr8 58655372 58656010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05766 10 212 Carbohydrate Esterase AT5G53370 27.536 1.77e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05766 - - cam:101503417 345.895