Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05764 ATGGACAAACTCATATTCAATTGTTGCATTGCATACTTTTTCCTTTTCTCTCTCTTTCTTGTGCATGGCAAAGAATTTTCATGCAATCAAACTCCATACCCTCATGTGTGCAACCATTACATTGGTTCCACCACCACAAATACACTATCAACCCTAGATTCTTCTTCTTTCCATGATATGGCTCTTAAGGTTACCATGGACCAAGCCATTGAAGCACACAAACTTGTGTCAACCATGGAATTAAATAACTTCAAAGACAAGAAAGCCAAGTCAGCATGGGAAGATTGTTTAGAGCTTTATGAGGACACAATTTATCAACTCAAACGATCAATAAACTCAAATAATCTAAATGATAAATTAACTTGGCAAAGTGCTTCCATTACAAACCATCAAACTTGTCAAAATGGTTTCATTGATTTCAACCTTCCCTCTCACTTAAACTACTTCCCTTCCATGTTAGGCAACTTCTCTAAATTGCTTAGCAATTCCTTGTCCATTAGCAACACTCTCGCTTCATCATATTCATCCTCATCCTCGTCCTCGTTGTCAAATACTAAACAAAATGGAGGAAGAAAGTTATTGTCAGATGGATTTCCATCTTGGGTTTCAGGTTCAGAGAGAAAATTACTTCAGGCAACAACAGGAGCCGATATCGTAGTGGCACAAGACGGAAGCGGGCACTATAAAACAATCTCCGAAGGTGTAGCCGGAGCTTCTAAACTTAGTGGGAAAGGAAGAGTTATTATTCATGTGAAAGCAGGTGTTTATAAAGAGAATATTGATATCAAGAGGTCAGTGCAAAATTTAATGATATTTGGAGATGGAATGGATTCCACTATTGTCACTGGTAATCAAAATGCTATAGATGGTTCTACAACTTTTCGTTCAGCTACTTTTGCTGTTATGGGAGATGGTTTCATAGCTAAAGACATGACCTTTGAGAACACAGCCGGACCACAAAAACATCAAGCCGTGGCTCTCCGTTCCGGCGCTGACCACTCCGTCTTCTACCGTTGCGCCTTCAAAGGCTACCAAGACACCTTATATGTTTACGCCAACCGTCAATTCTACCGCGACTGCAACGTCTACGGAACAATCGATTTCATCTTCGGTAACGCTGTTTCCGTCCTTCAAAACTCCAACATCTTCATTAGAAAACCAATGGGCTACCAACAGAACACCGTAACGGCGCAGGGGCGTACAGATCCAAATGAAAACACCGGAATCGTGATTCATAACTGTCGCATAACCGCCGCAGGTGATTTGAAAGCGGTTCAGAATTCTATTAAAAGTTATCTTGGTAGACCATGGCAAAAATATTCAAGAACGGTTGTTATGAAAAGTAATATTGATGGTGTGATTAATTCTCAAGGTTGGGCTCCATGGAGTGGTGGATTTGCTTTGAGTACTCTTTATTATGGTGAATATTCGAATGTTGGTGGCGGTGCCGGTACCGGTGGAAGAGTTAATTGGCCTGGTTTTCATGTTATTACTAATCCTTCTGAGGCTGTTAAATTTTCTGTTGGAAATTTTTTGGCTGGTGGTTCTTGGATTTCTGGTAGTGGTGTGCCGTTCGATGCAGGTTTGTGA 1590 0.4069 MDKLIFNCCIAYFFLFSLFLVHGKEFSCNQTPYPHVCNHYIGSTTTNTLSTLDSSSFHDMALKVTMDQAIEAHKLVSTMELNNFKDKKAKSAWEDCLELYEDTIYQLKRSINSNNLNDKLTWQSASITNHQTCQNGFIDFNLPSHLNYFPSMLGNFSKLLSNSLSISNTLASSYSSSSSSSLSNTKQNGGRKLLSDGFPSWVSGSERKLLQATTGADIVVAQDGSGHYKTISEGVAGASKLSGKGRVIIHVKAGVYKENIDIKRSVQNLMIFGDGMDSTIVTGNQNAIDGSTTFRSATFAVMGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCAFKGYQDTLYVYANRQFYRDCNVYGTIDFIFGNAVSVLQNSNIFIRKPMGYQQNTVTAQGRTDPNENTGIVIHNCRITAAGDLKAVQNSIKSYLGRPWQKYSRTVVMKSNIDGVINSQGWAPWSGGFALSTLYYGEYSNVGGGAGTGGRVNWPGFHVITNPSEAVKFSVGNFLAGGSWISGSGVPFDAGL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05764 529 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 170 IPR035513 -
Trre8g05764 529 Pfam Pectinesterase 217 514 IPR000070 GO:0030599|GO:0042545
Trre8g05764 529 PANTHER PECTINESTERASE 23 519 - -
Trre8g05764 529 SUPERFAMILY Pectin lyase-like 213 528 IPR011050 -
Trre8g05764 529 SMART PMEI_2 21 166 IPR006501 GO:0004857
Trre8g05764 529 ProSitePatterns Pectinesterase signature 1. 243 262 IPR018040 -
Trre8g05764 529 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 172 IPR035513 -
Trre8g05764 529 ProSitePatterns Pectinesterase signature 2. 362 371 IPR033131 -
Trre8g05764 529 Pfam Plant invertase/pectin methylesterase inhibitor 27 166 IPR006501 GO:0004857
Trre8g05764 529 FunFam Pectinesterase 211 529 - -
Trre8g05764 529 NCBIfam pectinesterase inhibitor domain 27 170 IPR006501 GO:0004857
Trre8g05764 529 FunFam Pectinesterase 25 170 - -
Trre8g05764 529 CDD PMEI-like_3 27 171 - -
Trre8g05764 529 SMART complete 251 432 IPR006633 -
Trre8g05764 529 Gene3D - 211 529 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05764 Trre-Chr8 58631169 58633532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05764 4 529 Carbohydrate Esterase AT1G23200 50.454 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05764 - - gmx:100775898 806.208