Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05761 ATGGCTTCTAAACGATTTTTGTTTGATTCTAATCAAGACAAAGACAAACAAAATGACAATAAACGAATGAGAACTGCATCAACATCTTCTTTAGCTTCGGTAATAGGAGAAGTGCTTATGGTGAAAAACATGCAAAGCCTTTTCTCAGGCTTGGAACCTTTACTTAGAAGAGTGGTGAACGAAGAAGTGGAACGAGCAATAGGACAATGTTATCCACCGCGATCAATAACAAAGTCATCTTCATTGAGACTCAAAGCAGTTGAAGAACCATTAAGTTTTGAATTCGTATTCAAAAAGAAACTTTCACTTCCAATATTCACAGGTAGTAAAATACTAGACATGGATGGAAACTCAATCAATGTGATTCTTGTTGACAAAAGTAATGGCCAAGAAGTCCCAACAAGTCTACCTCACCCAATCAAGATTGAAATTGTAGTTCTTGATGGAGATTTTCCATCTAATGAAAAGGAATCATCATGGACTAGTGAAGAATTCAATAGTAATATTGTGAAAGAGAGAACTGGGAAGAGGCCATTACTTACAGGAGAATTGAATCTTACTATGAGAGATGGAATTGCACCAATTGGAGATATTGAGTTCACCGATAATTCTAGCTGGATTCGTAGTAGAAAGTTTAGAGTTGCTGTTAGAGTTGCGCCCGGGACTAATCAAAGTGTCCGAATTCGTGAGGGCATGACTGAACCTTTTGTTGTTAAGGATCACCGCGGCGAATTGTACAAGAAACACCACCCACCAAATCTAAAAGATGAAGTGTGGAGGCTAGAGAAGATTGGAAAAGATGGAGCTTTCCACAAAAAATTGACCAAAGAAGGAATCACTACAGTACAAGAGTTTCTCAAGTTATCTGTTGTTGACCCTCTTAGGCTAAGAAAGATTTTAGGCATGGGAATGTCAGAGAAAATGTGGGAAGTGACAATTAAGCATGCAAAGACTTGTGTAATGGGAAACAAATTATATGTCTACCGTGGTCCACAATTTACCATATATCTCAATGCTATATGCCAAATGGTTAAAGCTTATGTCAATGGTCAAATTATTCCCAACCGAGACATGTCCAACATGAACAGGGGATACATAGAAGAAGCATATGCTAGATGGAATGAGTTGGAAGAAATTGATGAAATTTTGAATGACAACGTTGCTTTGTTAACTCAAGGTGAAACTGTGGAACAATTTCAAAACAATAATAATCATCAAGCACCGGTTATAGCATATGATCAAAATGACTTTTTTGGTGATAAATCTATAGATGGTGGAAACTATGTAGCAAGTCATAATAATAATGCACAAATAGGTTGCATCCAGTGGTCACAACCACATGCCACGTCACCATTCATGAATGGCATATTATCTTATAGCTTCTCAGATTTACAACCAGAAGGTGTTGATATAATGCCTTCAACTTCAAGGTGGCATTAG 1440 0.3729 MASKRFLFDSNQDKDKQNDNKRMRTASTSSLASVIGEVLMVKNMQSLFSGLEPLLRRVVNEEVERAIGQCYPPRSITKSSSLRLKAVEEPLSFEFVFKKKLSLPIFTGSKILDMDGNSINVILVDKSNGQEVPTSLPHPIKIEIVVLDGDFPSNEKESSWTSEEFNSNIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRVAPGTNQSVRIREGMTEPFVVKDHRGELYKKHHPPNLKDEVWRLEKIGKDGAFHKKLTKEGITTVQEFLKLSVVDPLRLRKILGMGMSEKMWEVTIKHAKTCVMGNKLYVYRGPQFTIYLNAICQMVKAYVNGQIIPNRDMSNMNRGYIEEAYARWNELEEIDEILNDNVALLTQGETVEQFQNNNNHQAPVIAYDQNDFFGDKSIDGGNYVASHNNNAQIGCIQWSQPHATSPFMNGILSYSFSDLQPEGVDIMPSTSRWH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05761 479 MobiDBLite consensus disorder prediction 1 26 - -
Trre8g05761 479 MobiDBLite consensus disorder prediction 8 22 - -
Trre8g05761 479 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Trre8g05761 479 Pfam Calmodulin binding protein C-terminal domain 324 379 IPR046829 -
Trre8g05761 479 PANTHER OS02G0177800 PROTEIN 3 439 IPR012416 GO:0005516
Trre8g05761 479 Pfam Calmodulin binding protein central domain 254 319 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05761 Trre-Chr8 58603490 58606083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05761 11 380 Calmodulin-binding Proteins AT5G57580 48.285 1.91e-113 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05761 - - gmx:100802257 632.869