Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05759 ATGGCTGCAAAACGTTTTTTGGATGATTCTAATCAAGACAAAGATAAACCAAATGATAAACGGATTAGAACTACAACTTCTTTTGCTTCGGTAATAGGAGAAGTGGTTATGGTGAAAAACATGCAAAACCTTTTCTCTGGCTTGGAACCTTTACTTAGAAGAGTGGTGAACGAAGAAGTGGAACGAGCAATAGGACAATGTTATCCACCGCGATCAATAACAAAGTCATCTTCATTGAGACTCAAAGCAGTTGAAGAACCATTAAGTTTTGAATTCGTATTCAAAAAGAAACTTTCACTTCCAATATTCACAGGTAGTAAATTACTAGACATGGATGGAAAATCAATCAATGTGATTCTTGTTGACAAAAGCAATGGCCAAGAAGTCCCTACAAGTCTACCTCACCCAATCAAGATTGAAATTGTAGTTCTTGATGGAGATTTTCCATCTAATGAAAAGGAATCATCATGGACTAGTGAAGAATTCAATAGTAATATTGTGAAAGAGAGAACTGGGAAGAGGCCATTGCTTACAGGAGAATTGAATCTTACCATGAGAGATGGAATTGCACCAATTGGAGATATTGAGTTCACCGATAATTCTAGCTGGATTCGTAGTAGAAAGTTTAGAGTTGCTGCTAGAATTGCGCCTGGGACTAATCAAAGTGTTCGTATTCGTGAAGGCATGACCGAACCTTTTGTTGTTAAGGATCATCGTGGTGAATTGTACAAGAAACACCATCCACCAAATCTAAAGGACGAAGTGTGGAGGCTAGAGAAGATTGGAAAAGATGGAGCTTTCCACAAAAAATTGACCAAAGAAGGAATTACTACCGTACAAGAGTTTCTCAAGTTATCTGTTGTTGACCCTCTTAGGCTAAGAAAGATTTTAGGAATTGGGATGTCAGAGAAAATGTGGGAAGTGACAATTAAGCATGCAAATACTTGTGTAATGGGAAACAAACTATATGTCTACCGTGTGCCTCAAGTTACCATATATCTCAATGCCATATGCCAAATGGTTAAAGCTTATGTCAACGGTCAAATTATTCCCAACCGAGACATGCCCAACATGAACAAGGGATACATAGAAAAATTGGTGAGAGAAGCATATGCTAGATGGAATGAGTTGGAGGAAATTGATGAAGTTTTGAATGATAATGTTGCTTTGTTAACTCAAGGTGAAACTGTGGAACAATTTCAAAACAATAATAATCATCAAGCACCGGTTATAGCATATGATCAAAATGACTTTTTTGGTGATAAATCTCTAGAGGGTGGAAACTATGTAGCAAGCCATAATAATAATGCACAAATAGGTGGCATCCAGTGGTCACCACCATTTCCCACTTCACCATTCATGAATGCCATATCTTATAGCTTCACAGATTCACAATCAGATGATGGTGATATAACCCCTTCAACTTCAGTACCAGTTATTGATGGAGCTTCAAGGTGGCTTTAA 1464 0.3764 MAAKRFLDDSNQDKDKPNDKRIRTTTSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAIGQCYPPRSITKSSSLRLKAVEEPLSFEFVFKKKLSLPIFTGSKLLDMDGKSINVILVDKSNGQEVPTSLPHPIKIEIVVLDGDFPSNEKESSWTSEEFNSNIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAARIAPGTNQSVRIREGMTEPFVVKDHRGELYKKHHPPNLKDEVWRLEKIGKDGAFHKKLTKEGITTVQEFLKLSVVDPLRLRKILGIGMSEKMWEVTIKHANTCVMGNKLYVYRVPQVTIYLNAICQMVKAYVNGQIIPNRDMPNMNKGYIEKLVREAYARWNELEEIDEVLNDNVALLTQGETVEQFQNNNNHQAPVIAYDQNDFFGDKSLEGGNYVASHNNNAQIGGIQWSPPFPTSPFMNAISYSFTDSQSDDGDITPSTSVPVIDGASRWL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05759 487 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
Trre8g05759 487 MobiDBLite consensus disorder prediction 1 20 - -
Trre8g05759 487 Pfam Calmodulin binding protein C-terminal domain 321 380 IPR046829 -
Trre8g05759 487 PANTHER OS02G0177800 PROTEIN 1 438 IPR012416 GO:0005516
Trre8g05759 487 Pfam Calmodulin binding protein central domain 251 316 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05759 Trre-Chr8 58594690 58597122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05759 3 381 Calmodulin-binding Proteins AT5G57580 49.479 2.86e-119 362