Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05741 ATGAATTCCCCTCCATCTGATAGAGTCATTATTCTACCCAGAGAAGTGGGTAGTCCGGATGACATTTTCGATGGAATTGATAGAAGAAACGGACATTTAATAAACACTCATGGTGAGGTGGAAGCTAAACATCGATCGGTTTTGGTTCAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGACAAATGTCACGGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACGTTTCTCAGAACCTTGGAAGCATTAGGGTTGCCCCGGTTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTTAGAGCGAAAACTTTGACAAATTCTTTGGGAGATACTGTTTCTTCAACCAATTCCAATGCATCAAGTCCTCGTGGGTTTGCAGCTTCGAGTTTTCATTATTCGCCACCATCTAGTGTGACAGATCAGAGGAAGGTTTCAACTGAGTCAACAAGGTTTCAAGGTGTTATGAGTAGCCCTCTTATGGCGGAATCATCAGCTTCATTAATATACCAAGTTGGTCATAAATTCCACGAGGTTTTTCAAATTAAACCCGGTAGCTATGCAGATCTTCCTGCTGCAAAGATATCAGAAATGATGAAATCAAACAGTTTAGATAACGCTCCCACGCAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGTGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGGCGCATATCAACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAAGCTCGGGAAGAAAAATATCAATCGAGAATACGAGTACTCGAGGCACTTGTATCTGAAACTAGAGAAGAGAATGAGATGTTTACTACACAGCTTCAACAGTTGAAGGTCACAGACGTAGAAAAGAAGGAAAATGAAAAAGAAGTTATTAGGTTGACGAAACTGCTAGAGGACAAAAACGTAGAAATTTCAGAATTGACGCAAAAACTCGAAGCAATAAAAAAACAATATGAAGCACAATGCTCACAGTTGGAAGAAGAAGCTAGGGATGCTAAAGTAGAATTGAGACAAAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAAGAACGAGGCTAAGAAACTCGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAGCATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCTCTACAGAAATTTAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATTAAAGGGAGAGCGGTTTATGCAGAAGAGTGTAATCGATTAAGTTTAAATCTCAAACCACTCGTACATGCATCTCAGAACTATCAAGCTGTCCTTGCTGAAAATAAAAAATTGTTTAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATTTTGTCGAATTAGACCATTCCTTTTAAGCAAAAAGGAAAAACAGTCTATTGTAGAAGACATCGGTGAAAATGATTTGGTTGTGGCGAATCCTTCCAAAGAAGGGAAAGATGCACATCGGTCATTTAAGTTCAACAAGATTTTCGGTCCTACTGCAACTCAAGGAGACGTATACGCTGACATTTATCCATTTGTAAGATCAGTACTTGATGGATACAATGTATGTATATTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTCAATTATCGAGCTCTAAATGACCTCTTCAACATTTCCACAAGTAGAGCGAACTTCACAGACTATGAGATTTGGGTCCAAATGGTTGAGATATATAATGAGCAAGTTCGTGACTTTTTTTGCTTCTCTTGTTTCCTTGATTTGCACACACTTGGGATATTGACTCAATTGCAATCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTTCGGATGTTATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTTCTACTCTGCACGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACCGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTTCTGCCCTCGGAGATGTCATTTTTGCGCTTTCACAAAAGAGCTCATATATACCGTATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCTAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGTGCGTCAGCTGGTGGTATTTCTAAGTCGCTAAGTGCATCAGCCGGTGGTATTTCTAAGTCGCTAAGCATGTCAGTTGGTGGTATTTCTAAGCAAATTCAAAAACTACCAAGTGGAAGTTATAAGCATCCTGTTGAAAGTGATATCCAACAAGCAATGGATGATCAGAAAAATGAACTTCTACGTTCATATGGAACTTCTAGGCGAGAAACTCGAGGATTTTCAGATACAAATTCTCAAGAAAGATCAAGTGATTTTTCGGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATCACGAGTGAAGCTAAAAAATCTTCAACTAAGACGACAAAGTCTAATGCATTATCCAAAACATATCAAGCGGTACGGAAATTAGGCCGAATCTCATCTACCACGTCTATATCAAAAACAAAGGAATCCTCGAAGGAGTCCTCGAAGAAACCATCAGGTATCGCGAAAAGCACCAGTATTGACCAAATTAAACCTTCAAAACGATGGCTTTAG 3174 0.3919 MNSPPSDRVIILPREVGSPDDIFDGIDRRNGHLINTHGEVEAKHRSVLVQWLNNLLPSLDFSTNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLEALGLPRFEISDLEKGSMKPVVDCLLILRAKTLTNSLGDTVSSTNSNASSPRGFAASSFHYSPPSSVTDQRKVSTESTRFQGVMSSPLMAESSASLIYQVGHKFHEVFQIKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALVSETREENEMFTTQLQQLKVTDVEKKENEKEVIRLTKLLEDKNVEISELTQKLEAIKKQYEAQCSQLEEEARDAKVELRQKSHEYEHRLEELKNEAKKLEASSDSKYQEWSMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVIKGRAVYAEECNRLSLNLKPLVHASQNYQAVLAENKKLFNEVQELKGNIRVFCRIRPFLLSKKEKQSIVEDIGENDLVVANPSKEGKDAHRSFKFNKIFGPTATQGDVYADIYPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFNISTSRANFTDYEIWVQMVEIYNEQVRDFFCFSCFLDLHTLGILTQLQSNGIAVPEASMYPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSYIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKEARELMEQVTSMKNTILKKDEEIERLKSLSASAGGISKSLSASAGGISKSLSMSVGGISKQIQKLPSGSYKHPVESDIQQAMDDQKNELLRSYGTSRRETRGFSDTNSQERSSDFSDNNSIALGTETDGSSDNSITSEAKKSSTKTTKSNALSKTYQAVRKLGRISSTTSISKTKESSKESSKKPSGIAKSTSIDQIKPSKRWL 1057
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05741 1057 PRINTS Kinesin heavy chain signature 714 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05741 1057 PRINTS Kinesin heavy chain signature 794 815 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05741 1057 PRINTS Kinesin heavy chain signature 745 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05741 1057 PRINTS Kinesin heavy chain signature 589 610 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05741 1057 SMART kinesin_4 513 852 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05741 1057 MobiDBLite consensus disorder prediction 950 1008 - -
Trre8g05741 1057 MobiDBLite consensus disorder prediction 1020 1057 - -
Trre8g05741 1057 Coils Coil 495 515 - -
Trre8g05741 1057 ProSiteProfiles Calponin homology (CH) domain profile. 42 149 IPR001715 GO:0005515
Trre8g05741 1057 MobiDBLite consensus disorder prediction 945 1008 - -
Trre8g05741 1057 Coils Coil 848 868 - -
Trre8g05741 1057 SUPERFAMILY Calponin-homology domain, CH-domain 38 157 IPR036872 -
Trre8g05741 1057 Gene3D Kinesin motor domain 458 846 IPR036961 -
Trre8g05741 1057 Pfam Kinesin motor domain 521 844 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05741 1057 PANTHER KINESIN-LIKE PROTEIN KLP-3 366 1028 IPR027640 GO:0003777|GO:0007018
Trre8g05741 1057 MobiDBLite consensus disorder prediction 1037 1051 - -
Trre8g05741 1057 MobiDBLite consensus disorder prediction 154 189 - -
Trre8g05741 1057 Coils Coil 312 332 - -
Trre8g05741 1057 Gene3D - 352 393 - -
Trre8g05741 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 515 877 IPR027417 -
Trre8g05741 1057 ProSiteProfiles Kinesin motor domain profile. 515 844 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05741 1057 Gene3D - 34 150 IPR036872 -
Trre8g05741 1057 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 457 846 - -
Trre8g05741 1057 Pfam Calponin homology (CH) domain 44 144 IPR001715 GO:0005515
Trre8g05741 1057 Coils Coil 357 434 - -
Trre8g05741 1057 SMART ch_5 44 147 IPR001715 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre8g05741 Trre-Chr8 58453970 58459412 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05741 352 875 Calmodulin-binding Proteins AT5G65930 33.396 1.06e-66 243
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05741 K10406 - mof:131148644 1056.59