Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05740 ATGAATTCCCCTCCATCTGATAGAGTCATTATTCTACCCAGAGAAGTGGGTAGTCCGGATGACATTTTCGATGGAATTGATAGAAGAAACGGACATTTAATAAACACTCATGGTGAGGTGGAAGCTAAACATCGATCGGTTTTGGTTCAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGACAAATGTCACGGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACGTTTCTCAGAACCTTGGAAGCATTAGGGTTGCCCCGGTTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTTAGAGCGAAAACTTTGACAAATTCTTTGGGAGATACTGTTTCTTCAACCAATTCCAATGCATCAAGTCCTCGTGGGTTTGCAGCTTCGAGTTTTCATTATTCGCCACCATCTAGTGTGACAGATCAGAGGAAGGTTTCAACTGAGTCAACAAGGTTTCAAGGTGTTATGAGTAGCCCTCTTATGGCGGAATCATCAGCTTCATTAATATACCAAGTTGGTCATAAATTCCACGAGGTTTTTCAAATTAAACCCGGTAGCTATGCAGATCTTCCTGCTGCAAAGATATCAGAAATGATGAAATCAAACAGTTTAGATAACGCTCCCACGCAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGTGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGGCGCATATCAACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAAGCTCGGGAAGAAAAATATCAATCGAGAATACGAGTACTCGAGGCACTTGTATCTGAAACTAGAGAAGAGAATGAGAGCGAAGTTTGGCAACAGATGTTTACTACACAGCTTCAACAGTTGAAGGTCACAGACGTAGAAAAGAAGGAAAATGAAAAAGAAGTTATTAGGTTGACGAAACTGCTAGAGGACAAAAACGTAGAAATTTCAGAATTGACGCAAAAACTCGAAGCAATAAAAAAACAATATGAAGCACAATGCTCACAGTTGGAAGAAGAAGCTAGGGATGCTAAAGTAGAATTGAGACAAAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAAGAACGAGGCTAAGAAACTCGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAGCATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCTCTACAGAAATTTAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATTAAAGGGAGAGCGGTTTATGCAGAAGAGTGTAATCGATTAAGTTTAAATCTCAAACCACTCGTACATGCATCTCAGAACTATCAAGCTGTCCTTGCTGAAAATAAAAAATTGTTTAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATTTTGTCGAATTAGACCATTCCTTTTAAGCAAAAAGGAAAAACAGTCTATTGTAGAAGACATCGGTGAAAATGATTTGGTTGTGGCGAATCCTTCCAAAGAAGGGAAAGATGCACATCGGTCATTTAAGTTCAACAAGATTTTCGGTCCTACTGCAACTCAAGGAGACGTATACGCTGACATTTATCCATTTGTAAGATCAGTACTTGATGGATACAATGTATGTATATTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTCAATTATCGAGCTCTAAATGACCTCTTCAACATTTCCACAAGTAGAGCGAACTTCACAGACTATGAGATTTGGGTCCAAATGGTTGAGATATATAATGAGCAAGTTCGTGACTTTTTTTGCTTCTCTTGTTTCCTTGATTTGCACACACTTGGGATATTGACTCAATTGCAATCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTTCGGATGTTATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTTCTACTCTGCACGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACCGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTTCTGCCCTCGGAGATGTCATTTTTGCGCTTTCACAAAAGAGCTCATATATACCGTATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCTAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGTGCGTCAGCTGGTGGTATTTCTAAGTCGCTAAGTGCATCAGCCGGTGGTATTTCTAAGTCGCTAAGCATGTCAGTTGGTGGTATTTCTAAGCAAATTCAAAAACTACCAAGTGGAAGTTATAAGCATCCTGTTGAAAGTGATATCCAACAAGCAATGGATGATCAGAAAAATGAACTTCTACGTTCATATGGAACTTCTAGGCGAGAAACTCGAGGATTTTCAGATACAAATTCTCAAGAAAGATCAAGTGATTTTTCGGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATCACGAGTGAAGCTAAAAAATCTTCAACTAAGACGACAAAGTCTAATGCATTATCCAAAACATATCAAGCGGTACGGAAATTAGGCCGAATCTCATCTACCACGTCTATATCAAAAACAAAGGAATCCTCGAAGGAGTCCTCGAAGAAACCATCAGGTATCGCGAAAAGCACCAGTATTGACCAAATTAAACCTTCAAAACGATGGCTTTAG 3192 0.3925 MNSPPSDRVIILPREVGSPDDIFDGIDRRNGHLINTHGEVEAKHRSVLVQWLNNLLPSLDFSTNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLEALGLPRFEISDLEKGSMKPVVDCLLILRAKTLTNSLGDTVSSTNSNASSPRGFAASSFHYSPPSSVTDQRKVSTESTRFQGVMSSPLMAESSASLIYQVGHKFHEVFQIKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALVSETREENESEVWQQMFTTQLQQLKVTDVEKKENEKEVIRLTKLLEDKNVEISELTQKLEAIKKQYEAQCSQLEEEARDAKVELRQKSHEYEHRLEELKNEAKKLEASSDSKYQEWSMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVIKGRAVYAEECNRLSLNLKPLVHASQNYQAVLAENKKLFNEVQELKGNIRVFCRIRPFLLSKKEKQSIVEDIGENDLVVANPSKEGKDAHRSFKFNKIFGPTATQGDVYADIYPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFNISTSRANFTDYEIWVQMVEIYNEQVRDFFCFSCFLDLHTLGILTQLQSNGIAVPEASMYPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSYIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKEARELMEQVTSMKNTILKKDEEIERLKSLSASAGGISKSLSASAGGISKSLSMSVGGISKQIQKLPSGSYKHPVESDIQQAMDDQKNELLRSYGTSRRETRGFSDTNSQERSSDFSDNNSIALGTETDGSSDNSITSEAKKSSTKTTKSNALSKTYQAVRKLGRISSTTSISKTKESSKESSKKPSGIAKSTSIDQIKPSKRWL 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05740 1063 MobiDBLite consensus disorder prediction 1043 1057 - -
Trre8g05740 1063 Gene3D - 358 399 - -
Trre8g05740 1063 ProSiteProfiles Calponin homology (CH) domain profile. 42 149 IPR001715 GO:0005515
Trre8g05740 1063 Pfam Kinesin motor domain 527 850 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05740 1063 Gene3D Kinesin motor domain 463 852 IPR036961 -
Trre8g05740 1063 ProSiteProfiles Kinesin motor domain profile. 521 850 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05740 1063 SUPERFAMILY Calponin-homology domain, CH-domain 38 157 IPR036872 -
Trre8g05740 1063 Coils Coil 363 440 - -
Trre8g05740 1063 SMART kinesin_4 519 858 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05740 1063 MobiDBLite consensus disorder prediction 1026 1063 - -
Trre8g05740 1063 MobiDBLite consensus disorder prediction 154 189 - -
Trre8g05740 1063 MobiDBLite consensus disorder prediction 956 1014 - -
Trre8g05740 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 883 IPR027417 -
Trre8g05740 1063 Coils Coil 312 332 - -
Trre8g05740 1063 PANTHER KINESIN-LIKE PROTEIN KLP-3 371 1034 IPR027640 GO:0003777|GO:0007018
Trre8g05740 1063 Coils Coil 501 521 - -
Trre8g05740 1063 MobiDBLite consensus disorder prediction 951 1014 - -
Trre8g05740 1063 PRINTS Kinesin heavy chain signature 720 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05740 1063 PRINTS Kinesin heavy chain signature 800 821 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05740 1063 PRINTS Kinesin heavy chain signature 595 616 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05740 1063 PRINTS Kinesin heavy chain signature 751 769 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05740 1063 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 463 852 - -
Trre8g05740 1063 Coils Coil 854 874 - -
Trre8g05740 1063 Pfam Calponin homology (CH) domain 44 144 IPR001715 GO:0005515
Trre8g05740 1063 Gene3D - 34 150 IPR036872 -
Trre8g05740 1063 SMART ch_5 44 147 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05740 Trre-Chr8 58453970 58459412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05740 355 881 Calmodulin-binding Proteins AT5G65930 33.208 1.24e-66 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05740 K10406 - mof:131148644 1051.2