Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre8g05739 | ATGAATTCCCCTCCATCTGATAGAGTCATTATTCTACCCAGAGAAGTGGGTAGTCCGGATGACATTTTCGATGGAATTGATAGAAGAAACGGACATTTAATAAACACTCATGGTGAGGTGGAAGCTAAACATCGATCGGTTTTGGTTCAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGACAAATGTCACGGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACGTTTCTCAGAACCTTGGAAGCATTAGGGTTGCCCCGGTTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTTAGAGCGAAAACTTTGACAAATTCTTTGGGAGATACTGTTTCTTCAACCAATTCCAATGCATCAAGTCCTCGTGGGTTTGCAGCTTCGAGTTTTCATTATTCGCCACCATCTAGTGTGACAGATCAGAGGAAGGTTTCAACTGAGTCAACAAGGTTTCAAGGTGTTATGAGTAGCCCTCTTATGGCGGAATCATCAGCTTCATTAATATACCAAGTTGGTCATAAATTCCACGAGGTTTTTCAAATTAAACCCGGTAGCTATGCAGATCTTCCTGCTGCAAAGATATCAGAAATGATGAAATCAAACAGTTTAGATAACGCTCCCACGCAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGTGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGGCGCATATCAACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAAGCTCGGGAAGAAAAATATCAATCGAGAATACGAGTACTCGAGGCACTTGTATCTGAAACTAGAGAAGAGAATGAGAGCGAAGTTTGGCAACAGATGTTTACTACACAGCTTCAACAGTTGAAGGTCACAGACGTAGAAAAGAAGGAAAATGAAAAAGAAGTTATTAGGTTGACGAAACTGCTAGAGGACAAAAACGTAGAAATTTCAGAATTGACGCAAAAACTCGAAGCAATAAAAAAACAATATGAAGCACAATGCTCACAGTTGGAAGAAGAAGCTAGGGATGCTAAAGTAGAATTGAGACAAAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAAGAACGAGGCTAAGAAACTCGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAGCATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCTCTACAGAAATTTAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATTAAAGGGAGAGCGGTTTATGCAGAAGAGTGTAATCGATTAAGTTTAAATCTCAAACCACTCGTACATGCATCTCAGAACTATCAAGCTGTCCTTGCTGAAAATAAAAAATTGTTTAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATTTTGTCGAATTAGACCATTCCTTTTAAGCAAAAAGGAAAAACAGTCTATTGTAGAAGACATCGGTGAAAATGATTTGGTTGTGGCGAATCCTTCCAAAGAAGGGAAAGATGCACATCGGTCATTTAAGTTCAACAAGATTTTCGGTCCTACTGCAACTCAAGGAGACGTATACGCTGACATTTATCCATTTGTAAGATCAGTACTTGATGGATACAATGTATGTATATTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTCAATTATCGAGCTCTAAATGACCTCTTCAACATTTCCACAAGTAGAGCGAACTTCACAGACTATGAGATTTGGGTCCAAATGGTTGAGATATATAATGAGCAAGTTCGTGACTTGTTGTCAACCGAGGGTTCTCCAAAAAGACTTGGGATATTGACTCAATTGCAATCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTTCGGATGTTATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTTCTACTCTGCACGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACCGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTTCTGCCCTCGGAGATGTCATTTTTGCGCTTTCACAAAAGAGCTCATATATACCGTATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCTAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGTGCGTCAGCTGGTGGTATTTCTAAGTCGCTAAGTGCATCAGCCGGTGGTATTTCTAAGTCGCTAAGCATGTCAGTTGGTGGTATTTCTAAGCAAATTCAAAAACTACCAAGTGGAAGTTATAAGCATCCTGTTGAAAGTGATATCCAACAAGCAATGGATGATCAGAAAAATGAACTTCTACGTTCATATGGAACTTCTAGGCGAGAAACTCGAGGATTTTCAGATACAAATTCTCAAGAAAGATCAAGTGATTTTTCGGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATCACGAGTGAAGCTAAAAAATCTTCAACTAAGACGACAAAGTCTAATGCATTATCCAAAACATATCAAGCGGTACGGAAATTAGGCCGAATCTCATCTACCACGTCTATATCAAAAACAAAGGAATCCTCGAAGGAGTCCTCGAAGAAACCATCAGGTATCGCGAAAAGCACCAGTATTGACCAAATTAAACCTTCAAAACGATGGCTTTAG | 3186 | 0.3936 | MNSPPSDRVIILPREVGSPDDIFDGIDRRNGHLINTHGEVEAKHRSVLVQWLNNLLPSLDFSTNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLEALGLPRFEISDLEKGSMKPVVDCLLILRAKTLTNSLGDTVSSTNSNASSPRGFAASSFHYSPPSSVTDQRKVSTESTRFQGVMSSPLMAESSASLIYQVGHKFHEVFQIKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALVSETREENESEVWQQMFTTQLQQLKVTDVEKKENEKEVIRLTKLLEDKNVEISELTQKLEAIKKQYEAQCSQLEEEARDAKVELRQKSHEYEHRLEELKNEAKKLEASSDSKYQEWSMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVIKGRAVYAEECNRLSLNLKPLVHASQNYQAVLAENKKLFNEVQELKGNIRVFCRIRPFLLSKKEKQSIVEDIGENDLVVANPSKEGKDAHRSFKFNKIFGPTATQGDVYADIYPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFNISTSRANFTDYEIWVQMVEIYNEQVRDLLSTEGSPKRLGILTQLQSNGIAVPEASMYPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSYIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKEARELMEQVTSMKNTILKKDEEIERLKSLSASAGGISKSLSASAGGISKSLSMSVGGISKQIQKLPSGSYKHPVESDIQQAMDDQKNELLRSYGTSRRETRGFSDTNSQERSSDFSDNNSIALGTETDGSSDNSITSEAKKSSTKTTKSNALSKTYQAVRKLGRISSTTSISKTKESSKESSKKPSGIAKSTSIDQIKPSKRWL | 1061 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre8g05739 | 1061 | Gene3D | - | 358 | 399 | - | - | |
Trre8g05739 | 1061 | ProSiteProfiles | Calponin homology (CH) domain profile. | 42 | 149 | IPR001715 | GO:0005515 | |
Trre8g05739 | 1061 | SMART | kinesin_4 | 519 | 856 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre8g05739 | 1061 | MobiDBLite | consensus disorder prediction | 954 | 1032 | - | - | |
Trre8g05739 | 1061 | Gene3D | - | 34 | 150 | IPR036872 | - | |
Trre8g05739 | 1061 | Coils | Coil | 852 | 872 | - | - | |
Trre8g05739 | 1061 | Pfam | Kinesin motor domain | 527 | 848 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre8g05739 | 1061 | MobiDBLite | consensus disorder prediction | 949 | 1061 | - | - | |
Trre8g05739 | 1061 | SUPERFAMILY | Calponin-homology domain, CH-domain | 38 | 157 | IPR036872 | - | |
Trre8g05739 | 1061 | Coils | Coil | 363 | 440 | - | - | |
Trre8g05739 | 1061 | FunFam | p-loop containing nucleoside triphosphate hydrolases superfamily protein | 463 | 850 | - | - | |
Trre8g05739 | 1061 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 521 | 881 | IPR027417 | - | |
Trre8g05739 | 1061 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 374 | 1032 | IPR027640 | GO:0003777|GO:0007018 | |
Trre8g05739 | 1061 | MobiDBLite | consensus disorder prediction | 1041 | 1055 | - | - | |
Trre8g05739 | 1061 | MobiDBLite | consensus disorder prediction | 154 | 189 | - | - | |
Trre8g05739 | 1061 | Coils | Coil | 312 | 332 | - | - | |
Trre8g05739 | 1061 | Coils | Coil | 501 | 521 | - | - | |
Trre8g05739 | 1061 | PRINTS | Kinesin heavy chain signature | 595 | 616 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre8g05739 | 1061 | PRINTS | Kinesin heavy chain signature | 749 | 767 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre8g05739 | 1061 | PRINTS | Kinesin heavy chain signature | 798 | 819 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre8g05739 | 1061 | PRINTS | Kinesin heavy chain signature | 718 | 735 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre8g05739 | 1061 | Gene3D | Kinesin motor domain | 463 | 850 | IPR036961 | - | |
Trre8g05739 | 1061 | ProSiteProfiles | Kinesin motor domain profile. | 521 | 848 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre8g05739 | 1061 | Pfam | Calponin homology (CH) domain | 44 | 144 | IPR001715 | GO:0005515 | |
Trre8g05739 | 1061 | SMART | ch_5 | 44 | 147 | IPR001715 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre8g05739 | Trre-Chr8 | 58453970 | 58459412 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre8g05739 | 355 | 879 | Calmodulin-binding Proteins | AT5G65930 | 34.087 | 1.41e-69 | 252 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre8g05739 | K10406 | - | cave:132185285 | 1065.45 |