Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05739 ATGAATTCCCCTCCATCTGATAGAGTCATTATTCTACCCAGAGAAGTGGGTAGTCCGGATGACATTTTCGATGGAATTGATAGAAGAAACGGACATTTAATAAACACTCATGGTGAGGTGGAAGCTAAACATCGATCGGTTTTGGTTCAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGACAAATGTCACGGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACGTTTCTCAGAACCTTGGAAGCATTAGGGTTGCCCCGGTTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTTAGAGCGAAAACTTTGACAAATTCTTTGGGAGATACTGTTTCTTCAACCAATTCCAATGCATCAAGTCCTCGTGGGTTTGCAGCTTCGAGTTTTCATTATTCGCCACCATCTAGTGTGACAGATCAGAGGAAGGTTTCAACTGAGTCAACAAGGTTTCAAGGTGTTATGAGTAGCCCTCTTATGGCGGAATCATCAGCTTCATTAATATACCAAGTTGGTCATAAATTCCACGAGGTTTTTCAAATTAAACCCGGTAGCTATGCAGATCTTCCTGCTGCAAAGATATCAGAAATGATGAAATCAAACAGTTTAGATAACGCTCCCACGCAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGTGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGGCGCATATCAACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAAGCTCGGGAAGAAAAATATCAATCGAGAATACGAGTACTCGAGGCACTTGTATCTGAAACTAGAGAAGAGAATGAGAGCGAAGTTTGGCAACAGATGTTTACTACACAGCTTCAACAGTTGAAGGTCACAGACGTAGAAAAGAAGGAAAATGAAAAAGAAGTTATTAGGTTGACGAAACTGCTAGAGGACAAAAACGTAGAAATTTCAGAATTGACGCAAAAACTCGAAGCAATAAAAAAACAATATGAAGCACAATGCTCACAGTTGGAAGAAGAAGCTAGGGATGCTAAAGTAGAATTGAGACAAAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAAGAACGAGGCTAAGAAACTCGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAGCATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCTCTACAGAAATTTAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATTAAAGGGAGAGCGGTTTATGCAGAAGAGTGTAATCGATTAAGTTTAAATCTCAAACCACTCGTACATGCATCTCAGAACTATCAAGCTGTCCTTGCTGAAAATAAAAAATTGTTTAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATTTTGTCGAATTAGACCATTCCTTTTAAGCAAAAAGGAAAAACAGTCTATTGTAGAAGACATCGGTGAAAATGATTTGGTTGTGGCGAATCCTTCCAAAGAAGGGAAAGATGCACATCGGTCATTTAAGTTCAACAAGATTTTCGGTCCTACTGCAACTCAAGGAGACGTATACGCTGACATTTATCCATTTGTAAGATCAGTACTTGATGGATACAATGTATGTATATTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTCAATTATCGAGCTCTAAATGACCTCTTCAACATTTCCACAAGTAGAGCGAACTTCACAGACTATGAGATTTGGGTCCAAATGGTTGAGATATATAATGAGCAAGTTCGTGACTTGTTGTCAACCGAGGGTTCTCCAAAAAGACTTGGGATATTGACTCAATTGCAATCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTTCGGATGTTATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTTCTACTCTGCACGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACCGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTTCTGCCCTCGGAGATGTCATTTTTGCGCTTTCACAAAAGAGCTCATATATACCGTATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCTAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGTGCGTCAGCTGGTGGTATTTCTAAGTCGCTAAGTGCATCAGCCGGTGGTATTTCTAAGTCGCTAAGCATGTCAGTTGGTGGTATTTCTAAGCAAATTCAAAAACTACCAAGTGGAAGTTATAAGCATCCTGTTGAAAGTGATATCCAACAAGCAATGGATGATCAGAAAAATGAACTTCTACGTTCATATGGAACTTCTAGGCGAGAAACTCGAGGATTTTCAGATACAAATTCTCAAGAAAGATCAAGTGATTTTTCGGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATCACGAGTGAAGCTAAAAAATCTTCAACTAAGACGACAAAGTCTAATGCATTATCCAAAACATATCAAGCGGTACGGAAATTAGGCCGAATCTCATCTACCACGTCTATATCAAAAACAAAGGAATCCTCGAAGGAGTCCTCGAAGAAACCATCAGGTATCGCGAAAAGCACCAGTATTGACCAAATTAAACCTTCAAAACGATGGCTTTAG 3186 0.3936 MNSPPSDRVIILPREVGSPDDIFDGIDRRNGHLINTHGEVEAKHRSVLVQWLNNLLPSLDFSTNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLEALGLPRFEISDLEKGSMKPVVDCLLILRAKTLTNSLGDTVSSTNSNASSPRGFAASSFHYSPPSSVTDQRKVSTESTRFQGVMSSPLMAESSASLIYQVGHKFHEVFQIKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALVSETREENESEVWQQMFTTQLQQLKVTDVEKKENEKEVIRLTKLLEDKNVEISELTQKLEAIKKQYEAQCSQLEEEARDAKVELRQKSHEYEHRLEELKNEAKKLEASSDSKYQEWSMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVIKGRAVYAEECNRLSLNLKPLVHASQNYQAVLAENKKLFNEVQELKGNIRVFCRIRPFLLSKKEKQSIVEDIGENDLVVANPSKEGKDAHRSFKFNKIFGPTATQGDVYADIYPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFNISTSRANFTDYEIWVQMVEIYNEQVRDLLSTEGSPKRLGILTQLQSNGIAVPEASMYPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSYIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKEARELMEQVTSMKNTILKKDEEIERLKSLSASAGGISKSLSASAGGISKSLSMSVGGISKQIQKLPSGSYKHPVESDIQQAMDDQKNELLRSYGTSRRETRGFSDTNSQERSSDFSDNNSIALGTETDGSSDNSITSEAKKSSTKTTKSNALSKTYQAVRKLGRISSTTSISKTKESSKESSKKPSGIAKSTSIDQIKPSKRWL 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05739 1061 Gene3D - 358 399 - -
Trre8g05739 1061 ProSiteProfiles Calponin homology (CH) domain profile. 42 149 IPR001715 GO:0005515
Trre8g05739 1061 SMART kinesin_4 519 856 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05739 1061 MobiDBLite consensus disorder prediction 954 1032 - -
Trre8g05739 1061 Gene3D - 34 150 IPR036872 -
Trre8g05739 1061 Coils Coil 852 872 - -
Trre8g05739 1061 Pfam Kinesin motor domain 527 848 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05739 1061 MobiDBLite consensus disorder prediction 949 1061 - -
Trre8g05739 1061 SUPERFAMILY Calponin-homology domain, CH-domain 38 157 IPR036872 -
Trre8g05739 1061 Coils Coil 363 440 - -
Trre8g05739 1061 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 463 850 - -
Trre8g05739 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 881 IPR027417 -
Trre8g05739 1061 PANTHER KINESIN-LIKE PROTEIN KLP-3 374 1032 IPR027640 GO:0003777|GO:0007018
Trre8g05739 1061 MobiDBLite consensus disorder prediction 1041 1055 - -
Trre8g05739 1061 MobiDBLite consensus disorder prediction 154 189 - -
Trre8g05739 1061 Coils Coil 312 332 - -
Trre8g05739 1061 Coils Coil 501 521 - -
Trre8g05739 1061 PRINTS Kinesin heavy chain signature 595 616 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05739 1061 PRINTS Kinesin heavy chain signature 749 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05739 1061 PRINTS Kinesin heavy chain signature 798 819 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05739 1061 PRINTS Kinesin heavy chain signature 718 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05739 1061 Gene3D Kinesin motor domain 463 850 IPR036961 -
Trre8g05739 1061 ProSiteProfiles Kinesin motor domain profile. 521 848 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05739 1061 Pfam Calponin homology (CH) domain 44 144 IPR001715 GO:0005515
Trre8g05739 1061 SMART ch_5 44 147 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05739 Trre-Chr8 58453970 58459412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05739 355 879 Calmodulin-binding Proteins AT5G65930 34.087 1.41e-69 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05739 K10406 - cave:132185285 1065.45