Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05732 ATGTCAATACGATTAGGACAAGTTCCAACAATCATTGTCTCTTCATCTTCAGCTGCAGAACAATTTCTCAAAACAAACGACGTCGTTTTCTCAAGCCGTCCAAAACTTGAAGCTACTCATTACCTCTCTTATGGTTCTAAAGGTTTGGTTTTCTCTGAATATGGTCCTTATTGGCGTAATGTCAGAAAAATTTGTACTCTGCAGCTTTTAAGTGCTTCTAAAGTTGAGTCGTTTTGGCCTTTGAGAAAAAGGGAAATGGAATTGGCTATGAAGTTGGTAAAGAAATCTGCTAGTTTAGGTGAGGTTGTTGATTTGAGTGAGTTTGTTCATAATGTTATTATGGATATTGTTTATAAAATGGTGTTGGGGTGTAGTGTTGATGAGGAGTTTGATTTGAAGGGACAAATTCAACAGGGGATGGAACTTTCTGGTGCTTTTAATCTTTCTGATTATGTTCCTTTTCTTGGAGTTTTTGATCTTCAGGGATTAAAAAGAAGGTACAAGAGAACTAGTAAAGCAATGGACCAAGTGTTGGAGAAGATAATTAAGGAACATGAACAAAGTTCACATGTACAAAATGAAGAGAAGAAACATAAGGACTTCGTAGACATTCTACTATCACTGATGCACCAACCGATCAACCCTTCAGATGAACAAAACCATGTCATTGATCGAACAAACATAAAGGCTATACTCTTAGACATGATTGCCGGTGCATTTGAAACTTCAGCAGCCATTGTGGAGTGGGCTTTATCCGAGCTCATGAGACATCCAAGAGTGATGAAAAATCTCCAACAAGTAGGGGTGTTCACGGTTCATAAACTGCACTGA 831 0.3803 MSIRLGQVPTIIVSSSSAAEQFLKTNDVVFSSRPKLEATHYLSYGSKGLVFSEYGPYWRNVRKICTLQLLSASKVESFWPLRKREMELAMKLVKKSASLGEVVDLSEFVHNVIMDIVYKMVLGCSVDEEFDLKGQIQQGMELSGAFNLSDYVPFLGVFDLQGLKRRYKRTSKAMDQVLEKIIKEHEQSSHVQNEEKKHKDFVDILLSLMHQPINPSDEQNHVIDRTNIKAILLDMIAGAFETSAAIVEWALSELMRHPRVMKNLQQVGVFTVHKLH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05732 276 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05732 276 PRINTS E-class P450 group I signature 247 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05732 276 PRINTS E-class P450 group I signature 227 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05732 276 Pfam Cytochrome P450 2 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05732 276 SUPERFAMILY Cytochrome P450 2 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05732 276 Coils Coil 160 180 - -
Trre8g05732 276 PANTHER CYTOCHROME P450 93A3-LIKE 1 266 - -
Trre8g05732 276 Gene3D Cytochrome P450 1 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05732 Trre-Chr8 58386020 58387543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05732 1 266 Cytochrome P450 AT3G48320 35.581 4.82e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05732 - - gmx:100814172 388.652