Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05710 ATGATGAAGAAAACACAAACATTCTTCTTCGTTACACTTTTTCTAACCATCATAAACACACTCTCCTTTTCAGCTCTCGCAATCGATGACCCATCTCTTGTCTTCGAAAACAACCGTATCAGAGACGCTTACACAGCATTACAATCTTGGAAACAATCTATTCTCTCTGATCCATTAAATTTCACAACAAACTGGGTTGGATCCAATGTATGCAGCTACACCGGCATTTACTGTGCTCAAGCATTAGACAACCCTAATATACGCACAGTCGCCGGTATCGATCTCAATCACGCCGACATTGCCGGTTATTTACCGGATGAGCTTGGTCTTTTGGTAGATCTTGCACTTTTCCACATAAACTCTAACAGATTCTGTGGTACTGTACCACACACTTTCAACAAATTGAAACTTCTCTTCGAATTGGATCTCAGTAATAACAGATTCGCGGGGAAGTTTCCAGAAGTTGTATTAAACCTTCCTGCTCTCAAGTTCTTGGATATAAGGTTCAATGAATTCGAAGGTACGGTTCCAAAAGCGCTTTTTGATAAAGACCTAGACGCGATTTTCATAAACGACAACCGTTTTGCGTTTGAGTTACCTGATAATTTTGGTAACTCGCCTGTTTCCGTTGTCGTTTTGGCAAACAACAAATTCCATGGCTGCATTCCTTCCAGTTTAGGGAACATGTCTAATTTAAACGAAATCAATTTTTTGAATAATTTGTTTAAGTCATGTTTACCTTCTGAGATTGGATTGTTGAAGAATCTCACAGTTTTCGATGTGAGTTTTAATCAGTTGGTTGGTTCGTTACCGTCGGCTATTGGTGGTGCGGTGAGTTTGGAACAGCTTAATGTGGCGCATAATGTGTTTTCTGGTCAAATTCCGGCGAGTATTTGTATGTTGCCTAATCTTAAGAACTTTACATTTTCGGATAATTTCTTTACTGGTGAACCTCCGGCGTGTGCTGCTTTGCCGGCGGTTGATGATAAGAGAAATTGTTTGCCGTCGAGGCCGTTACAGAGGTCTCCTGGAGAATGTGCATCGGTTTTGTCTAAACCGGTGGATTGTAAGTCGTTTAAGTGTAAACCTTTTGATCCTTCTTTGCCTTCGCCATCGCCGGTAGTGTCACCTATCTCTCCACAACCTCCGGCAGTGTCACCTATCTCTCCGTCACCACCGGGAGTGTCACCTTCTCCTCCATCACCGCCAGCTGTGTCACCTTCTTTGCCGCCACCTGTAACAGTGACACCTATCACTCCATCACCGCCGGGAGTTGCACCTTCTTCTCCACCACCGTCAACAGGGACACCTGTCACTCCATCACCGCCGGGAGGGGAACCTTATTCTCCACCGCCGTCAACAGGGACACCTATTTCTCCAGCACCGCCAGTAGTGTCACCTTCATCTCCACCACCAACGCACTCTCCTCCACATGTGCATTCACCACCTCCATCTCCAACAACTCCTGTGGTGTCACCACCGTCCCATACTACTCCATCTCCTGATTCACCGCCATCTCCGCCACTAAATTCACCGCCATCTCCTGATTCTCATTATGGCTCATCCCCTCCTCCAACTCATTCACCACCATCATGGCCCCCACATTCCCCTGTTTTTTCACCACCGCCAGTAACAACACCTTCCTCTCCACCAACGCCGATAGTGCCACCTTTCTATCCACCTCCAACGCACTCTTCTCCGCCAGTGTTTTTACCACCACCAGCAGATCCTCATTATGGCCAATCACCGCCTCCACCTCATTCCCCTGTTCTTTCACCACCACCAGGAACATCACCTTTCTCTCCACCAACGCCTGTAGTGCCACCTTCCTTTCCACCACCAACACACTCTTCTCCGCCGGTGTATTTACCACCACCGACAGACCCTCATTATGGCCAATCACCGCCACCACCTCCATCGCCCCCTCATTCCCCTGTTCATTTACCACCACAAACACCACCATATCAATCTCCACCGCCTTCTGTAGGACCTCATCCGTCACCATCACCACCTTGTGAAGAGCATCCAGCCCCACCACCACCACCATCGTCTTCTTCCACATCACCACCGCCAGTATATGTTTCTCCACATCCACCATTTCAATATACTCCCCCATCACCACCACATCCTTCCCCTGTGCATTACAGTTCCCCACCACCACCACCCCATGTTCATTACAGCTGGCCTCCACCACCCGCATTATGGTCTCCTCCACCACCCACCCCTGCATATGGAGGCCCATTGCCACCAATCTTTGGGCTCCCCTACGCATCGCCTCCACCACCACCTTACTATTGA 2298 0.4822 MMKKTQTFFFVTLFLTIINTLSFSALAIDDPSLVFENNRIRDAYTALQSWKQSILSDPLNFTTNWVGSNVCSYTGIYCAQALDNPNIRTVAGIDLNHADIAGYLPDELGLLVDLALFHINSNRFCGTVPHTFNKLKLLFELDLSNNRFAGKFPEVVLNLPALKFLDIRFNEFEGTVPKALFDKDLDAIFINDNRFAFELPDNFGNSPVSVVVLANNKFHGCIPSSLGNMSNLNEINFLNNLFKSCLPSEIGLLKNLTVFDVSFNQLVGSLPSAIGGAVSLEQLNVAHNVFSGQIPASICMLPNLKNFTFSDNFFTGEPPACAALPAVDDKRNCLPSRPLQRSPGECASVLSKPVDCKSFKCKPFDPSLPSPSPVVSPISPQPPAVSPISPSPPGVSPSPPSPPAVSPSLPPPVTVTPITPSPPGVAPSSPPPSTGTPVTPSPPGGEPYSPPPSTGTPISPAPPVVSPSSPPPTHSPPHVHSPPPSPTTPVVSPPSHTTPSPDSPPSPPLNSPPSPDSHYGSSPPPTHSPPSWPPHSPVFSPPPVTTPSSPPTPIVPPFYPPPTHSSPPVFLPPPADPHYGQSPPPPHSPVLSPPPGTSPFSPPTPVVPPSFPPPTHSSPPVYLPPPTDPHYGQSPPPPPSPPHSPVHLPPQTPPYQSPPPSVGPHPSPSPPCEEHPAPPPPPSSSSTSPPPVYVSPHPPFQYTPPSPPHPSPVHYSSPPPPPHVHYSWPPPPALWSPPPPTPAYGGPLPPIFGLPYASPPPPPYY 765
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05710 765 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 525 - -
Trre8g05710 765 MobiDBLite consensus disorder prediction 370 723 - -
Trre8g05710 765 FunFam Leucine-rich repeat extensin-like protein 1 44 205 - -
Trre8g05710 765 Gene3D Ribonuclease Inhibitor 209 334 IPR032675 -
Trre8g05710 765 Pfam Leucine rich repeat 116 171 IPR001611 GO:0005515
Trre8g05710 765 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 223 318 - -
Trre8g05710 765 Gene3D Ribonuclease Inhibitor 42 208 IPR032675 -
Trre8g05710 765 Pfam Leucine rich repeat N-terminal domain 44 78 IPR013210 -
Trre8g05710 765 SUPERFAMILY L domain-like 42 325 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre8g05710 Trre-Chr8 58229718 58232015 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05710 1 361 Trihelix Transcription Factor Family AT4G18670 68.434 0.0 556
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05710 - - cam:101504763 633.254