Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05708 ATGAGTACTACCTCTTCTAATGGCGCACCCTCCCTCACCAACGTCCCCATCATCAAGTTCACAAAGCTATTCATCAATGGAGATTTTGTTGATTCAATTTCAGGGAAGACATTTGAGACAATAGATCCAAGAACAGGAGAGGTTATAGCAAGAATTAGCGAAGGAACCAAAGAAGACATCGATGTTGCTGTAAAGGCAGCCCGTTACGCATTTGATTCGGGTCCATGGCCTCGCTTGCCTGGCACTGAGAGAGCAAAAATTATGATGAAATTTGCGGACCTAATTGAGCAAAACATAGAAGAATTAGCAGCACTAGATGCCATTGATGCAGGAAAGTTGTACCATATGTGTAAGGCACTAGACATTCCCTCTGCAGCAAATACACTACGTTACTATGCAGGTGCAGCTGATAAAATTCATGGTGAGGTATTAAAAGCTTCAAGGGAGTTACATGCTTATACATTGATGGAACCAATTGGTGTTGTGGGACATATAATTCCATGGAATTTTCCCACTTCAATGTTCTTTATCAAGGTTAGCCCTTGTTTAGCTGCTGGCTGCACCATGGTCCTCAAACCTGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTAGCCAAATTGGCTGGAATCCCAGATGGTGTGATCAATGTAGTACCCGGATTTGGACCAACCGCTGGTGCTGCAGTTAGCGCACACATGGACATTGATGCGGTAAGCTTTACAGGTTCAACACAAACTGGGCGTAAGATAATGGAAGCTGCAGCTAAGAGTAACTTAAAACACGTTTCACTTGAATTGGGAGGAAAGTCACCCCTCATAATTTTTGATGATGCTGATATTGAAAAAGCTACTGAACTTGCTCTTATAGGCATTCTATTAAACAAGGGAGAAGTGTGTGTTGCAAGTTCACGTGTGTTTGTTCAAGAAGGGATCTATCATGAATTTGAGAAAAAATTGGTAGAAAAGGCAAAAAATTGGGTCGTTGGTGACCCCTTTGATCCTAAAGTTCAGCAAGGGCCTCAAGTTGATAAGAAGCAATTTGAAAAAGTTCTTTCATATATAGAGCATGGGAAGAGAGAAGGAGCTACCCTTTTGACTGGGGGCAAAACAATTGGAAACAAGGGATACTACATTGAGCCAACAATTTTCTCTAATATAAAGGATGATATGCTTATAGCACAAGATGAAATATTTGGTCCTGTGTTGGCACTGAAGAAATTTAAGAGTGTTGAGGAAGCAATTAAGAGTGCAAATAATACAAGATATGGGCTAGCAGCAGGAATTGTGACAAAGAATTTGGATATAGCAAACACTGTGTCAAGATCCATTCGTGCAGGAACTATTTGGATAAACTGTTATTTTGCATTTGGAGATGATATTCCATTTGGAGGATATAAAATGAGTGGATTTGGAAGAGATTATGGATTAGAAGCACTTCACAAGTATCTACAAGTTAAATCTGTTGTTACTCCAATTTATAATTCTCCATGGCTCTAA 1506 0.4011 MSTTSSNGAPSLTNVPIIKFTKLFINGDFVDSISGKTFETIDPRTGEVIARISEGTKEDIDVAVKAARYAFDSGPWPRLPGTERAKIMMKFADLIEQNIEELAALDAIDAGKLYHMCKALDIPSAANTLRYYAGAADKIHGEVLKASRELHAYTLMEPIGVVGHIIPWNFPTSMFFIKVSPCLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVINVVPGFGPTAGAAVSAHMDIDAVSFTGSTQTGRKIMEAAAKSNLKHVSLELGGKSPLIIFDDADIEKATELALIGILLNKGEVCVASSRVFVQEGIYHEFEKKLVEKAKNWVVGDPFDPKVQQGPQVDKKQFEKVLSYIEHGKREGATLLTGGKTIGNKGYYIEPTIFSNIKDDMLIAQDEIFGPVLALKKFKSVEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIWINCYFAFGDDIPFGGYKMSGFGRDYGLEALHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05708 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 290 - -
Trre8g05708 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Trre8g05708 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Trre8g05708 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Trre8g05708 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Trre8g05708 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 491 - -
Trre8g05708 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
Trre8g05708 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Trre8g05708 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Trre8g05708 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05708 Trre-Chr8 58205080 58210258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05708 1 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.120 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05708 K12355 - gmx:100811540 889.797