Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05666 ATGGCTACTTCAATTCGACCCACTCTTTCTTCCTTTACCCTTTCACCTCTCTTCAATCGTTCTCCTCGATTCTCTTTCTCTCATTTTTCCACCGTAGCAGTTCCACGATCCCATAGTTTTGGCTTGAAATTGTTTAGAAAAAATGGAAACTCAATGAGAGTGATGGCATCTGGGAACGTGCCTTCATCAGTCACAGCTTCTTCATCAGAAAATTTACTGGAATGGGTCAAACAAGATAAAAGAAGATTGCTTCATGTTGTTTATCGTGTTGGGGACATGGATAGAACCATTAAATTTTATACTGAGTGTCTTGGAATGAAGCTACTCAGAAAGCGCGACATACCCGAGGAGAAATATACTAATGCTTTTCTTGGATATGGCCCTGAAGACTCACATTTTGTTATTGAACTAACATACAATTACGGAGTTGACAAGTATGACATTGGAACTGCATTTGGCCATTTTGGTATTGCGGTTGATGATATTGCAAAAACAGTGGAACTAATAAGAGCTAAGGGTGGCAAAATAACGAGAGAGCCTGGTCCTGTCAAAGGAGGCAAAACAGTAATTGCATTTGTTGAAGACCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAACCGTTCAATAGAATTTTACGAGAAGGCTTTTGGTATGGAGCTGCTTCGTACACGGGATAATCCAGAGTCCAAGTATACCATAGCAATGCTGGGATATGGTCCAGAAGATAAATCTGCTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCTGAAGCGATTAAACTATCCACGGGAAAGCTTACTCGGGAACCTGGACCGTTGCCTGGCATCAACACAAAAATTACTGCATGCTTGGATCCCGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTTAAGGAGTTGGAGTAG 1035 0.4097 MATSIRPTLSSFTLSPLFNRSPRFSFSHFSTVAVPRSHSFGLKLFRKNGNSMRVMASGNVPSSVTASSSENLLEWVKQDKRRLLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTAFGHFGIAVDDIAKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPESKYTIAMLGYGPEDKSAVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05666 344 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 213 336 IPR029068 -
Trre8g05666 344 CDD GlxI_Ni 83 204 - -
Trre8g05666 344 FunFam Lactoylglutathione lyase 79 208 - -
Trre8g05666 344 PANTHER LACTOYLGLUTATHIONE LYASE 60 344 - -
Trre8g05666 344 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 212 336 IPR037523 -
Trre8g05666 344 Gene3D - 53 207 IPR029068 -
Trre8g05666 344 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 215 330 IPR004360 -
Trre8g05666 344 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 83 203 IPR004360 -
Trre8g05666 344 ProSitePatterns Glyoxalase I signature 1. 85 106 IPR018146 GO:0004462|GO:0046872
Trre8g05666 344 FunFam Lactoylglutathione lyase 209 344 - -
Trre8g05666 344 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 81 211 IPR029068 -
Trre8g05666 344 ProSitePatterns Glyoxalase I signature 2. 149 161 IPR018146 GO:0004462|GO:0046872
Trre8g05666 344 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 82 206 IPR037523 -
Trre8g05666 344 ProSitePatterns Glyoxalase I signature 1. 215 236 IPR018146 GO:0004462|GO:0046872
Trre8g05666 344 Gene3D - 209 344 IPR029068 -
Trre8g05666 344 NCBIfam lactoylglutathione lyase 82 207 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05666 Trre-Chr8 57921506 57925718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05666 215 333 Calmodulin-binding Proteins AT1G08110 28.276 5.43e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05666 K01759 - gmx:100775714 598.586