Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05646 ATGGAACCTTTGGACGATTCAGATGCGCAACTCGAACGAGTCGACTCTGATCAGTTAACGTCCACAAGCTCCGGTTCAGGCATTTCCTCTGTATTCAGCACTGACGATTTACGTAACTTCAACAGTTCCGGCGACATTTCCTCTATCAGTAGCGGTTCAGGTGAGATTTCGACATTCACGGTTAACCGTGTGATTCTTGCACCTCCGTTGATCGCTGTGTCCAGTGACGAGACTACCGCTCCGGAAGAGGTTGTGATGACGACGGCGAGGGAGAAGTGCGTGGGAAGGAATAACAAAGGAGTGAGTTGGGGACATACTTCAGTGATTGGGAGGCGGAAAGAGATGGAGGACGCTATCGCCGTTATTCCTGGATTTATGTCCCGCACTTGCGATCACGTTGGCGGTTGCACAGCTCCCGGTTCTAGATCCTCCGGAGAGATCAGTCCTGTTCATTTCTTCGGCGTTTACGACGGTCACGGTGGCTCTCAGGTTGCTAAATTTTGTGCCAAGCGAATGCACGGTGTTATAGCAGAGGAGTGGGAGCGAGAAATAGCAGATGGCGCTGAATGGCAGAGAAAGTGGGAAGCTGTATTTGCTAATGGCTTTCAGAGGACTGACAAAGAGATCGAATCAGATGCAGTTGCACCAGAAATGGTTGGATCTACTGCCTCTGTGGTTGTTCTATCTGGTTGCCAAATTATTACATCAAACTGTGGCGACTCAAGGGCGGTTCTTTGCCGCAGGACTGAAACAGTCCCATTGACTGTGGATCAAAAGCCCGATAGAGAGGATGAACTCTTGAGAATTGAAGGAGAAGGTGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCAATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATCCCGGTTCCAGAGATTTCTTTTACAACAAGAACTGACGAGGATGAGTGTTTAATTTTGGCAAGTGATGGACTTTGGGACGTAATGACGAATGAGGAGGTAGGAGAAGTAGCACGCCGCATTCTAAGAAGGCGCCGCAGATCTTTGTCAATGGAGGAAATATCTCCAACACAAATTGTTGCTGATAGCCTCACTGAAATTGCCTGTGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAAAGAAAACGTCTGCAAAGGCCTCCTTCAATTTCCTAG 1206 0.4743 MEPLDDSDAQLERVDSDQLTSTSSGSGISSVFSTDDLRNFNSSGDISSISSGSGEISTFTVNRVILAPPLIAVSSDETTAPEEVVMTTAREKCVGRNNKGVSWGHTSVIGRRKEMEDAIAVIPGFMSRTCDHVGGCTAPGSRSSGEISPVHFFGVYDGHGGSQVAKFCAKRMHGVIAEEWEREIADGAEWQRKWEAVFANGFQRTDKEIESDAVAPEMVGSTASVVVLSGCQIITSNCGDSRAVLCRRTETVPLTVDQKPDREDELLRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEISFTTRTDEDECLILASDGLWDVMTNEEVGEVARRILRRRRRSLSMEEISPTQIVADSLTEIACGRNSKDNISIIVVDLKSKRKRLQRPPSIS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05646 401 SUPERFAMILY PP2C-like 96 388 IPR036457 -
Trre8g05646 401 ProSiteProfiles PPM-type phosphatase domain profile. 102 387 IPR001932 -
Trre8g05646 401 ProSitePatterns PPM-type phosphatase domain signature. 152 160 IPR000222 GO:0043169
Trre8g05646 401 Gene3D - 92 396 IPR036457 -
Trre8g05646 401 MobiDBLite consensus disorder prediction 14 28 - -
Trre8g05646 401 PANTHER PROTEIN PHOSPHATASE 86 387 IPR015655 GO:0004722|GO:0006470
Trre8g05646 401 SMART PP2C_4 91 385 IPR001932 -
Trre8g05646 401 MobiDBLite consensus disorder prediction 1 28 - -
Trre8g05646 401 Pfam Protein phosphatase 2C 110 380 IPR001932 -
Trre8g05646 401 CDD PP2Cc 104 387 IPR001932 -
Trre8g05646 401 FunFam Protein phosphatase 2C 51 95 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05646 Trre-Chr8 57771656 57776527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05646 103 397 PP2C-type Phosphatase Gene Family AT4G26080 52.381 1.47e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05646 K14497 - gmx:100793293 605.134