Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05590 ATGAGGTTACTATCACATGCGATTCTCAAAGTTCTCATTCTCTGCGATCTACTTCTCTGTTTTCCCTCATTCTCTTTCTCTCTCCTCGCCGATAACTCCGTCACGGAACCGGAGGTTATTCTTCCGGAAACTAACGTAACCGCCGCTGGCAATGCCTCACTCGCGGGATCCAACGAGGATAGTCTCGCTAACATGATTGATCGAGCTCTTGAAAGGGAGTTTCCCGAGAATGAACAGAACGAAGGTGCCGAAGATGCTGGTAGTTTCAACAACAGTGTTGCTGGACAGCAGGCTGTCTTAGAAACTGTTGCTAGAGTTAAGCCCAAGAAAAATGAGAGCAAAGAGGAAAAGTCATTTCAGTTCCATGATGTTTTCAATTTGGACAGTGAGAACCGGGTTGAGGATACGCCAACTTTAATTGATCGAAAGGACAATGTATTTATCATATCCAATCCCAAGTCAAAGTATCCTGTTCTGCAATTAGACTTGAGATTGATATCAGATCTTGTAGTTGTCATTGTCTCTGCAACCTGTGGTGGCATTGCTTTTGCTTGTGCTGGACAACCGGTTATGACTGGATATCTGTTAGCAGGATCCCTCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTCGAGACAGTTGCTCAATTCGGTGTCATCTTTTTGCTCTTTGCACTGGGCTTAGAGTTTTCCACAACAAAGCTTCGAGTTGTTCGAGCAGTGGCTATTCTTGGAGGTCTGCTGCAAATTCTCTTATTTATGTGCTTGTGTGGAATAATAGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTTCTATCCATGTCTTCAACAGCAGTGGTCTTGAAATTCCTAATGGAAAGGAACAGCGTCAATGCCCTTCATGGCCAGGTTATAATTGGAACTCTGATTCTGCAGGATTGTGCCGTTGGTTTGCTCTTTGCACTGCTTCCTGTCTTAGGTGGAACATCAGGTGTTCTTCAGGGAGTAATATCCATGAGTAAATCGTTGTTGACCTTAATTACATTTTTGGTCGTTTTGTCAATATTATCCCGTACTTGTGTACCATGGTTCCTTAAGCTTATGATAAGCTTGTCATCTCAGACCAATGAACTTTATCAATTGGCATCAGTTGCATTCTGCCTAATAGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGCCTTGAACTTGGTTCATTTGCTGCGGGAGTGATGATATCGACAACAGATCTTGGTCAACATACGCTTGAACAAGTTGAGCCAATTCGCAACTTTTTTGCTGCTCTGTTCTTGGCCAGTATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCAGCTGTTATATTGGTGATCATTGTAAAAACAATTGTTGCTGCAGCCGTTGTCAAGGGCTTTGGATACAACAACAAGACTTCCATTCTTGTTGGGATGTCCTTGGCACAAATTGGGGAATTTGCCTTTGTTCTTCTCAGCCGTGCTTCAAATGTTCATTTAGTTGAGGGAAAGTTGTATTTATTGCTCCTTGGAACCACAGCTCTCAGTCTGGTAACTACACCCTTGCTTTTCAAACTGATTCCTGCTGTTCTACATCTTGGTTCATTGCTCCGGTGGTTCCCTCCTGATAGTCCTGCTGAGATTGTCTTTAAAGGGGACAGCTTTCGTTCAGACAGTACTAAGCGTATAACTTTGATGGTTCAAGGCTCCCATGATTCATGA 1764 0.4286 MRLLSHAILKVLILCDLLLCFPSFSFSLLADNSVTEPEVILPETNVTAAGNASLAGSNEDSLANMIDRALEREFPENEQNEGAEDAGSFNNSVAGQQAVLETVARVKPKKNESKEEKSFQFHDVFNLDSENRVEDTPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQILLFMCLCGIIASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVIIGTLILQDCAVGLLFALLPVLGGTSGVLQGVISMSKSLLTLITFLVVLSILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLIVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIVKTIVAAAVVKGFGYNNKTSILVGMSLAQIGEFAFVLLSRASNVHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVLHLGSLLRWFPPDSPAEIVFKGDSFRSDSTKRITLMVQGSHDS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05590 587 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 34 578 IPR045158 GO:0015386|GO:0071805|GO:1902600
Trre8g05590 587 Pfam Sodium/hydrogen exchanger family 170 539 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre8g05590 587 Gene3D - 163 546 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05590 Trre-Chr8 57363373 57372371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05590 25 587 Antiporters AT2G19600 81.658 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05590 K26735 - gmx:100788884 942.954