Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05570 ATGTCAAGGTCTATTCAAGAGAAGAAGCTTGGTGCAGGACGTGTTGTGGCAGTGGCTATTGAAAATAATAAAACAAGTCAATATGCAGCTAAATGGGCTGTTGATAATCTTCTTCCTAAAGATCAACATTTATTATTAGTCCATGTTAGACAAAAAGCTTCTTCAATTCCTACAACAACTGGAAATCATGTACCTATTGATGTCAATGATGATGTGGCTAGAGCTTACATGCAACAAATGGACAATGAATCTAAGGAGCTTTTCGCTTTGTTTCGTGTATTCTGCAATAGAAAGAATATACAATGCAAAGAAATATTGTTAGAGGACATGGATATATCTAAGGGAATCATAGAAGGTATTACAACATATTCCATTGAGCTTCTTGTTCTTGGATCACCATCAAAGAGTGGTCTTGTAAGAAGATTTAGGACAACTGATGTTCCTAGCCTTGTGTCGAAAGGGGCACCCCCATTCTGCACGGTGTATATTATTTCTAAGGGAAAAATCTCATCTGTAAAAACTGCTACTTCTCCGTTACCTGTGAAAGCCGTACAACGTGCATTGCCTCCGCCACAACAGCTACAACAAAGTCCTGATAGAATGGATGTACAAGCACTAATGCGAAACCACCCACCACGACCATCACCAGAGAGGCCAACACACCTTTCTCGCCATCATCAATCCCATGAAGATGAAATCATATCACCATTTACAAGAGGTGCAAGACCAACACATAGACCGTACGAGTCCACGATCTCGTCTGATTCTGATATCTCATTTGTGAGCAGTGGAAGGCCGAGTGTTGATAGGATGTTCCCTTCTTTGTATGAAGAAATGGACTCTGGAAGTGGAATCACCCCTCGGCTTTCAGGAGGCTCAGATTATGATGTCAGAAGCTTCGGTTCGTCTTTCTCAGGTGCTAAGTCAATTGATCAAACTGAATATTCATTCAGTTCACAAGACAGTGGGAATGGGATGTCAATGTCATCACAACCAAGAATATCAAACTCGGATGAAGTGGAAGCTGAAATGAGGAGATTGAGGTTAGAGCTGAAGCAAACAATGGAAATGTATAGTACAGCTTGCAAGGAAGCACTGACAGCTAAACAAAAGGCACTGGAACTTCAGCGTTGGAAATTAGACGAACAAAGGAAGTTGGAAGACGCACGATTCTCTGAAGAAACAGCATTGGCGGTAGCTGAGAAAGAGAAAGCAAAATGTAAAGTTGCTATGGATGCAGCAGAAGCATCTCGAAAAATTGCAGAGTTGGAAGCACAGAAAAGAGCGAATGCAGAAATGAAATCTCACTCGGATTCTGATCAGAGGAAGAAGACAGGAGGAGGCGGAGGAGGAGGATCAGGAGACAGTTTCTTACACGGTTCTGCCCGCTACAGAAGATACACTATTGAGGAAATTGAAGAAGCAACAAACTACTTTTCCAACTCACTGAAAATTGGAGAAGGAGGTTATGGACCAGTCTATAGGGCTGAACTAGATCACACTCCAGTTGCTATAAAAGTGTTAAAACCTGATGCAGCTCAAGGACGATCGCAGTTTCAACAAGAGGTTGAAGTGTTGAGTAGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCGTGTCCAGAGTTCGGTTGCCTAGTGTATGAGCACATGACTAATGGAAGCTTGGATGATTGCCTCTTCAGGAGAAATAATAGTAGAATGCCAGTTCTACCATGGCAAATACGATTCCGAATCGCTGCGGAGATTGCCACCGGTCTCCTTTTCCTTCACCAGACAAAACCAGAACCATTGGTGCACCGTGACTTAAAACCTGGAAATATTTTGCTCGACCGGAACTATGTGAGCAAGATCAGTGATGTTGGGTTGGCAAGGCTTGTCCCTCCTTCGGTTGCAGACACAGTGACACAGTATCGCATGACCGCAACTGCTGGAACTTTCTGTTACATTGATCCGGAGTACCAACAAACAGGCATGCTCGGAACAAAGTCTGATATTTACTCACTTGGGATCATGCTTCTACAGATGATAACAGCAAAACCACCAATGGGTTTGAGTCACCATGTTGCAAGATCTATTGAGAAAGGTACTTTTCGCGAGATGCTTGACCCTGCTGTTGAGGATTGGCCAGTTGAACATGCAATGCATTTTGCCAAGCTTGCTCTTCAGTGTGCTGAAATGAGAAGAAAAGACAGACCTGATCTTGGGAAAGTTATTTTGCCTGAGCTTAACAAACTCAGAGATTTTGCTGATGAAAACATGCCTATGATGATGATGATGTTTGGTGCAAGAACTAACAACGTTTACTCACGAACCGGATTTTCCTCATCAAATCAAGACACAATGAGTGAATCCCAATCAATGTCAGGATATGAAAGCCATTCAAATTCATAA 2397 0.4259 MSRSIQEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQHLLLVHVRQKASSIPTTTGNHVPIDVNDDVARAYMQQMDNESKELFALFRVFCNRKNIQCKEILLEDMDISKGIIEGITTYSIELLVLGSPSKSGLVRRFRTTDVPSLVSKGAPPFCTVYIISKGKISSVKTATSPLPVKAVQRALPPPQQLQQSPDRMDVQALMRNHPPRPSPERPTHLSRHHQSHEDEIISPFTRGARPTHRPYESTISSDSDISFVSSGRPSVDRMFPSLYEEMDSGSGITPRLSGGSDYDVRSFGSSFSGAKSIDQTEYSFSSQDSGNGMSMSSQPRISNSDEVEAEMRRLRLELKQTMEMYSTACKEALTAKQKALELQRWKLDEQRKLEDARFSEETALAVAEKEKAKCKVAMDAAEASRKIAELEAQKRANAEMKSHSDSDQRKKTGGGGGGGSGDSFLHGSARYRRYTIEEIEEATNYFSNSLKIGEGGYGPVYRAELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSSIRHPNMVLLLGACPEFGCLVYEHMTNGSLDDCLFRRNNSRMPVLPWQIRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQMITAKPPMGLSHHVARSIEKGTFREMLDPAVEDWPVEHAMHFAKLALQCAEMRRKDRPDLGKVILPELNKLRDFADENMPMMMMMFGARTNNVYSRTGFSSSNQDTMSESQSMSGYESHSNS 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05570 798 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 455 551 - -
Trre8g05570 798 PANTHER OS02G0152300 PROTEIN 15 775 - -
Trre8g05570 798 CDD STK_N 15 167 - -
Trre8g05570 798 MobiDBLite consensus disorder prediction 206 263 - -
Trre8g05570 798 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 147 - -
Trre8g05570 798 MobiDBLite consensus disorder prediction 311 339 - -
Trre8g05570 798 Pfam Universal stress protein family 14 142 IPR006016 -
Trre8g05570 798 MobiDBLite consensus disorder prediction 311 337 - -
Trre8g05570 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Trre8g05570 798 Gene3D Phosphorylase Kinase; domain 1 459 551 - -
Trre8g05570 798 Gene3D Transferase(Phosphotransferase) domain 1 552 762 - -
Trre8g05570 798 ProSiteProfiles Protein kinase domain profile. 479 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g05570 798 MobiDBLite consensus disorder prediction 427 457 - -
Trre8g05570 798 Gene3D HUPs 14 164 IPR014729 -
Trre8g05570 798 MobiDBLite consensus disorder prediction 247 263 - -
Trre8g05570 798 MobiDBLite consensus disorder prediction 427 443 - -
Trre8g05570 798 FunFam U-box domain-containing protein 51 552 754 - -
Trre8g05570 798 SUPERFAMILY Protein kinase-like (PK-like) 461 739 IPR011009 -
Trre8g05570 798 Coils Coil 397 433 - -
Trre8g05570 798 Pfam Protein kinase domain 482 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g05570 798 MobiDBLite consensus disorder prediction 214 236 - -
Trre8g05570 798 MobiDBLite consensus disorder prediction 773 798 - -
Trre8g05570 798 Coils Coil 337 357 - -
Trre8g05570 798 SMART serkin_6 479 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05570 Trre-Chr8 57196247 57200184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05570 16 791 Receptor kinase-like Gene Family AT5G35380 53.915 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trre8g05570 Pkinase 5.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05570 - - mtr:11428996 1307.74