Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05567 ATGGCACTAATAACTAATATTATGAACAATAAAACCATATTCATTCTATTGTTATGTCTTGTTTCATCTTATGCTGAGTCCGACACTGAATTGCTCCTCAAGGTAAAGGACAATCTAGAAAAAAATGACAATGTATTGACATCATGGAACACAACAACAACTCCTTGTGACGGCGATCATAGTAATTGGTACGGTGTTCGTTGTTATCAAGGAAAAGTTTGGGGATTGAAGCTTGAGAATATGGGGCTAAAAGGGATCATTGATGTTGATTCTCTTAGGCAATTACCATATCTTAGAACTATAAGTTTCATGAATAATGATTTTGATGGTGGTTGGCCTGAGATTAACAAACTTGTTGGTCTTAAATCGGTTTTTCTTTCGAATAACAAATTTTCTGGAGACATTCCTGGTGATGCTTTTGAAGGTATGATGTGGTTGAAGAAAATTCATTTGTCAAATAATCAGTTTACAGGTGTTATTCCACCTTCTGTGGTATTGTTGCCAAAGCTTATGGAATTGAGATTGGATGGAAACAAATTCATTGGTCCTCTTCCTCATCTTAGACAATCCAGATTGAAATCATTCAATGTAGCTAATAATCAGTTGCATGGACAAATACCAACCACACTTAGTAAAATCGCCGTTTCTTCCTTTTCCGGTAATGAAGGTTTATGTGGAGCTCCATTGGCTGCATGTACTGCAAAGAAGCCGTCAATCGCAAGTATTTGTGTGGTTGCTGTGGTTGTTTGTGTGGCACTGATTGTGATCGGAGTCACAATATTTTTCATCCTTCATCGGCGAAGAAACCAGGAGCCATCACCGGGTCTAGAGAATCCACCTTCAGGCCACCACAACAATAAAATAGGACGGGGAGATATTGGTAATGAAAGTATGAAATCAACAAGATCAGTGAGTTCCACTCACAGCAGAAGAGGTGATCAAATGAAGTTATCTTTTATAAAAGATGACAGAGAAAGATTTGATTTGCAAGAGTTGTTGAGAGCTAATGCTGAGATTTTGGGAAGTGGTTGTTATAGTTCTTCTTATAAGGCTTCGTTGACAAGTGGAACAACAATAGTTGTGAAGAGGTTTAAGCAAATGAATAATGTAGGGAAGGAAGAGTTTCAAGAACATATGAGAAGGATAGGAAGATTGAATCATCAAAATTTGATTCCTCTTGTGGCTTACTATTATAGAAAAGAGGAGAAGCTTTTGGTTACTGACTATGTTCAAAATGGAAGTCTCGCTGTTCGCCTTCATGGACATCAAGCACTAGGTGAACCAAGCCTTGATTGGCCAATAAGATTGAAGATTGTGAAAGGAATAGCAAAAGGACTTGAATATCTATACAAAGATATGCCAAGCCTAATTGCACCTCATGGAAATCTCAAATCCTCAAATGTACTTCTAACTGAAACATTTGAACCAATCCTCACAGATTATGGATTAGTACCTGTAACAAACCAAGAAATGGCAAAGGACATAATGGTAATATACAAATCACCAGAATATTTACAACAAGGAAGAATAACAAAGAAAAGTGATGTTTGGTGTCTTGGAGTATTAATATTGGAAATTTTAACCGGTAAATTTCCGGCTACATTTTTACAACAAGGTAAAGGAAGTGAGGTGAGTTTAGCAAATTGGGTTATTTCAGTAGTACCTGAGGAGTGGAATAGTTCAGTGTTTGATAAAGAAATGGGTGAAACAAAGAATGGTGAGGGTGAGATGGAAAAACTTTTGAAAATTGCATTGAGTTGTTGTGAAGTTGATGTTGATAAAAGATGTGATTTGAAAGAAGCTGTAGAGAAAATTCAACAAGTGAAAGAGAGAGATGTTCATGATGATGATGATGGTGATGACAACATTTTTACAACTGACATGAAATGA 1890 0.3656 MALITNIMNNKTIFILLLCLVSSYAESDTELLLKVKDNLEKNDNVLTSWNTTTTPCDGDHSNWYGVRCYQGKVWGLKLENMGLKGIIDVDSLRQLPYLRTISFMNNDFDGGWPEINKLVGLKSVFLSNNKFSGDIPGDAFEGMMWLKKIHLSNNQFTGVIPPSVVLLPKLMELRLDGNKFIGPLPHLRQSRLKSFNVANNQLHGQIPTTLSKIAVSSFSGNEGLCGAPLAACTAKKPSIASICVVAVVVCVALIVIGVTIFFILHRRRNQEPSPGLENPPSGHHNNKIGRGDIGNESMKSTRSVSSTHSRRGDQMKLSFIKDDRERFDLQELLRANAEILGSGCYSSSYKASLTSGTTIVVKRFKQMNNVGKEEFQEHMRRIGRLNHQNLIPLVAYYYRKEEKLLVTDYVQNGSLAVRLHGHQALGEPSLDWPIRLKIVKGIAKGLEYLYKDMPSLIAPHGNLKSSNVLLTETFEPILTDYGLVPVTNQEMAKDIMVIYKSPEYLQQGRITKKSDVWCLGVLILEILTGKFPATFLQQGKGSEVSLANWVISVVPEEWNSSVFDKEMGETKNGEGEMEKLLKIALSCCEVDVDKRCDLKEAVEKIQQVKERDVHDDDDGDDNIFTTDMK 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05567 629 Pfam Leucine rich repeat N-terminal domain 26 68 IPR013210 -
Trre8g05567 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 612 IPR046959 -
Trre8g05567 629 FunFam pollen receptor-like kinase 1 302 409 - -
Trre8g05567 629 SUPERFAMILY Protein kinase-like (PK-like) 338 606 IPR011009 -
Trre8g05567 629 MobiDBLite consensus disorder prediction 271 312 - -
Trre8g05567 629 Gene3D Ribonuclease Inhibitor 190 232 IPR032675 -
Trre8g05567 629 Gene3D Phosphorylase Kinase; domain 1 299 409 - -
Trre8g05567 629 MobiDBLite consensus disorder prediction 609 629 - -
Trre8g05567 629 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Trre8g05567 629 MobiDBLite consensus disorder prediction 296 312 - -
Trre8g05567 629 SUPERFAMILY L domain-like 26 230 - -
Trre8g05567 629 FunFam Pollen receptor-like kinase 1 410 619 - -
Trre8g05567 629 Gene3D Transferase(Phosphotransferase) domain 1 410 621 - -
Trre8g05567 629 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g05567 629 Gene3D Ribonuclease Inhibitor 24 188 IPR032675 -
Trre8g05567 629 Pfam Protein kinase domain 337 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05567 Trre-Chr8 57187910 57190547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05567 13 627 Receptor kinase-like Gene Family AT5G35390 52.038 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre8g05567 Pkinase 7.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05567 - - gmx:100804368 892.108