Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05558 ATGGGTTATCCTATAATAGGTGAAAGTCTTGAATTTCTATCCACAGGATGGAAAGGAAAACCTGAAAAATTCATTTTTGACCGTATGATTAAATATTCATCTGAACTTTTTAAAACATCAATCTTAGGTGAACCTACGGTTGTTTTTTGTGGTGCCGCATGTAACAAGTTTTTGTTTTCAAACGAGAATAAATATGTTGTTGCATGGTGGCCAGAAAGTGTGAACAAAATATTTCCTACAACTTTGGATTCTAAGGAAGAATCTATAAAGACTAGAAAATTGCTTCCTCAATTTCTCAAACCCGAAGCTCTACAACGTTATGTTGGTATCATGGATACAATTGCTCAAAGACACTTTTCTCTTTGGGAGAATAAATATCAAGTCACCGTCTACCCTTTGGCTAAGAGGTATACTTTTATGTTGGCTTGTCGTTTGTTCATGAGCATCGAGGACGAGAACCGTATAGCAAAATTTAGCGAACCATTCCATTTATTGGCGGCCGGAATCATATCAGTACCGATCAATTTGCCCGGAACACCATTCAACAAAGCTATAAAGGCCTCAAACTTCATAAGAATAGAGTTGTTGAAGATCATAAGGCAAAGAAAGATGGATTTAGCACAAGGGGTGGCATCACCAACACAAGACATATTGTCTCACATGTTGTTGACGCGTAATGAAAATGGAGAGTTTTTGAATGAACTTAAAATTGCTGATAAGATTCTTGGCCTTCTCATCGGAGGACATGACACTGCTAGCGCCGCATGCACTTTCATTGTTAAATATCTTGCTGAGCTACCTCACATTTATGATAAAGTCTATCAAGAGCAAATGGAAATTGCAAAATCGAAATCCCCAGGAGAGTTGTTGAATTGGGATGACCTCACGAAAATGAGATACTCTTGGAATGTAGCTTGTGAAGTAATGAGAGTTGCCCCTCCACTCCAAGGAGGTTTCAGGGAAGCCATCACTGACTTTATATTCAATGGGTTCTCAATTCCTAAGGGATGGAAGCTCTATTGGAGTGCAAATTCAACACATAAGAACCCAGAATGTTTTCCCATGCCAGAGAAATTTGACCCAACAAGATTTGAAGGAAATGGACCAGCTCCTTACACCTTTGTGCCATTTGGTGGAGGACCAAGGATGTGCCCTGGAAAAGAGTATGCAAGATTAGAAATACTAATTTTCATGCACAATTTAGTGAAAAGGTTCAAGTGGGAAAAGTTGATTCCAGATGAGAAGATTATTGTTGATCCCTTCCCTATCCCAGCAAAGGGCCTCCCAATTCGCCTTTATCCACACAAAGCTTGA 1314 0.3927 MGYPIIGESLEFLSTGWKGKPEKFIFDRMIKYSSELFKTSILGEPTVVFCGAACNKFLFSNENKYVVAWWPESVNKIFPTTLDSKEESIKTRKLLPQFLKPEALQRYVGIMDTIAQRHFSLWENKYQVTVYPLAKRYTFMLACRLFMSIEDENRIAKFSEPFHLLAAGIISVPINLPGTPFNKAIKASNFIRIELLKIIRQRKMDLAQGVASPTQDILSHMLLTRNENGEFLNELKIADKILGLLIGGHDTASAACTFIVKYLAELPHIYDKVYQEQMEIAKSKSPGELLNWDDLTKMRYSWNVACEVMRVAPPLQGGFREAITDFIFNGFSIPKGWKLYWSANSTHKNPECFPMPEKFDPTRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILIFMHNLVKRFKWEKLIPDEKIIVDPFPIPAKGLPIRLYPHKA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05558 437 FunFam Taxadiene 5-alpha hydroxylase 1 435 - -
Trre8g05558 437 CDD CYP90-like 28 434 - -
Trre8g05558 437 SUPERFAMILY Cytochrome P450 2 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PANTHER CYTOCHROME P450 26 1 423 - -
Trre8g05558 437 Gene3D Cytochrome P450 1 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PRINTS E-class P450 group I signature 374 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PRINTS E-class P450 group I signature 384 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PRINTS E-class P450 group I signature 342 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PRINTS E-class P450 group I signature 256 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PRINTS E-class P450 group I signature 236 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 377 386 IPR017972 GO:0005506|GO:0016705
Trre8g05558 437 PRINTS P450 superfamily signature 375 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05558 437 Pfam Cytochrome P450 4 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05558 Trre-Chr8 57128834 57133860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05558 2 344 Cytochrome P450 AT5G36110 58.453 1.58e-136 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05558 K20667 - ag:CBN88269 793.497