Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05557 ATGGAGCATAACTTCTATCTCTCCATTCTCCTTCTCTTTGTCTCTCTCATTTCTCTCTCACTTTTTTTTCTCTTCAATAAACACAAATCTCCATGGAATTTGCCACCGGGAAAAATGGGTTATCCTATAATAGGTGAAAGTCTTGAATTTCTATCCACAGGATGGAAAGGAAAACCTGAAAAATTCATTTTTGACCGTATGATTAAATATTCATCTGAACTTTTTAAAACATCAATCTTAGGTGAACCTACGGTTGTTTTTTGTGGTGCCGCATGTAACAAGTTTTTGTTTTCAAACGAGAATAAATATGTTGTTGCATGGTGGCCAGAAAGTGTGAACAAAATATTTCCTACAACTTTGGATTCTAAGGAAGAATCTATAAAGACTAGAAAATTGCTTCCTCAATTTCTCAAACCCGAAGCTCTACAACGTTATGTTGGTATCATGGATACAATTGCTCAAAGACACTTTTCTCTTTGGGAGAATAAATATCAAGTCACCGTCTACCCTTTGGCTAAGAGGTATACTTTTATGTTGGCTTGTCGTTTGTTCATGAGCATCGAGGACGAGAACCGTATAGCAAAATTTAGCGAACCATTCCATTTATTGGCGGCCGGAATCATATCAGTACCGATCAATTTGCCCGGAACACCATTCAACAAAGCTATAAAGGCCTCAAACTTCATAAGAATAGAGTTGTTGAAGATCATAAGGCAAAGAAAGATGGATTTAGCACAAGGGGTGGCATCACCAACACAAGACATATTGTCTCACATGTTGTTGACGCGTAATGAAAATGGAGAGTTTTTGAATGAACTTAAAATTGCTGATAAGATTCTTGGCCTTCTCATCGGAGGACATGACACTGCTAGCGCCGCATGCACTTTCATTGTTAAATATCTTGCTGAGCTACCTCACATTTATGATAAAGTCTATCAAGAGCAAATGGAAATTGCAAAATCGAAATCCCCAGGAGAGTTGTTGAATTGGGATGACCTCACGAAAATGAGATACTCTTGGAATGTAGCTTGTGAAGTAATGAGAGTTGCCCCTCCACTCCAAGGAGGTTTCAGGGAAGCCATCACTGACTTTATATTCAATGGGTTCTCAATTCCTAAGGGATGGAAGCTCTATTGGAGTGCAAATTCAACACATAAGAACCCAGAATGTTTTCCCATGCCAGAGAAATTTGACCCAACAAGATTTGAAGGAAATGGACCAGCTCCTTACACCTTTGTGCCATTTGGTGGAGGACCAAGGATGTGCCCTGGAAAAGAGTATGCAAGATTAGAAATACTAATTTTCATGCACAATTTAGTGAAAAGGTTCAAGTGGGAAAAGTTGATTCCAGATGAGAAGATTATTGTTGATCCCTTCCCTATCCCAGCAAAGGGCCTCCCAATTCGCCTTTATCCACACAAAGCTTGA 1428 0.3915 MEHNFYLSILLLFVSLISLSLFFLFNKHKSPWNLPPGKMGYPIIGESLEFLSTGWKGKPEKFIFDRMIKYSSELFKTSILGEPTVVFCGAACNKFLFSNENKYVVAWWPESVNKIFPTTLDSKEESIKTRKLLPQFLKPEALQRYVGIMDTIAQRHFSLWENKYQVTVYPLAKRYTFMLACRLFMSIEDENRIAKFSEPFHLLAAGIISVPINLPGTPFNKAIKASNFIRIELLKIIRQRKMDLAQGVASPTQDILSHMLLTRNENGEFLNELKIADKILGLLIGGHDTASAACTFIVKYLAELPHIYDKVYQEQMEIAKSKSPGELLNWDDLTKMRYSWNVACEVMRVAPPLQGGFREAITDFIFNGFSIPKGWKLYWSANSTHKNPECFPMPEKFDPTRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILIFMHNLVKRFKWEKLIPDEKIIVDPFPIPAKGLPIRLYPHKA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05557 475 CDD CYP90-like 66 472 - -
Trre8g05557 475 Gene3D Cytochrome P450 25 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 SUPERFAMILY Cytochrome P450 27 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 FunFam Taxadiene 5-alpha hydroxylase 25 473 - -
Trre8g05557 475 Pfam Cytochrome P450 35 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PANTHER CYTOCHROME P450 26 32 461 - -
Trre8g05557 475 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g05557 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05557 Trre-Chr8 57128834 57133974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05557 28 382 Cytochrome P450 AT5G36110 58.449 1.92e-140 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05557 K20667 - ag:CBN88269 836.254