Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05545 ATGGACGACGTAAAATCTTCAATACCTCTCGTATCATTCCTCGAACGTCTTCAACAAACCGCATTCAACACATTCAACAACCATTCCAATTTCGATCCTAAAACCTACGTCGATTTACCTCTCAAATTTCCCCTTTCCGTTACAGATCACGCTTTCCAGAATCTTCCTAAATCATCCACCGGTTCAGTTTCCGTTCACGATTTGAACCGGTTTATTGAAACGTATTTTGAAGGTGCAGGTGATGATTTGGTGTACTTTGATCCAGAGGATTTTGTTCCTGTTCCTGAAGATTTTTTGCCTAAAGTGAAAAACCCTGAGGTTAGAGCTTGGGCGATTAAGGTTCATTCTCTTTGGAAAAATTTGAGTAGGAAAGTTTCAAGTGAGGTGAAGACTCATCCTGAGTTTCATACTCTGCTTCCTGTTCTTGATTCTGTTGTTATTCCTGGTTCGCGATTTCGCGAAGTTTATTATTGGGATTCTTATTGGGTAATTAGGGGTTTGTTGGCAAGTAAAATGTATAAGACTGCTAAAGGTATTGTCAACAATCTCATTTCCTTCATTGAGGAATATGGGTTTGTTTTGAACGGTGCTAGAGCATACTACACTAATAGGAGCCAGCCTCCTCTTTTAAGCGCTATGATTTATGAGATACACCATAGAACCGGTGATGTGGAATTAGTTAAAAGATCTCTACCTGCACTACTGAAAGAGCATGAGTTTTGGAATTCAGATATACATAAAGTGACTGTTTCGGATGCTCAAGGTTGCACTCACACCTTAAATCGCTATTACGCAAGGTGGAACAAACCCAGACCAGAGTCGTCCATAATGGACAAGGCATCTGCTTCCAAGTTCACAACTGTTTCTGAAAAACAACAATTTTACCGTGAACTAGCATCAGCAGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGACATCCTCCCAACTTCACAACATTGTCTACAACTTCAGTGATACCTGTTGATTTAAATGCATTTATACTCGGGATGGAACTTAATATTGCCTTCTTTGCAAATGTTACTGGAGATCATATCACTGCCAAACACTTCTTGCAAATTTCTGATGTTAGAAAGGAGGCAATCAACTCTGTTTTCTGGAATGCAAACATGAAACAATGGCTTGATTCCTGGCTCAGCAATACCACACATGAGAAGGTTCATGATTGGGATACTCTGCACCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATGCTTCCCTTGTGGGTAATGTTCTCAAAAGTCTCAAAACTTCTGGACTGCTTCGTGCTGCTGGAATTGCAACTTCTTTGACTGATTCAGGACAGCAGTGGGATTTTCCAAATGGTTGGGCTCCACTTCAACACATGTTAGTTGAAGGTCTGGTAAAATCAGGGTTGGAAGAAGCAAGGTCATTGGCTGAGGAAATTGCCATCAGATGGATCACTACCAACTATATTGTTTACAAGAAAACAGATGTAATGCACGAAAAGTTTGATGTGGAGCATTGTGGAGAATTCGGAGGTGGGGGTGAATACGTACCTCAGACTGGTTTTGGCTGGTCGAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGTAAAATAGAATGTTGA 1665 0.4078 MDDVKSSIPLVSFLERLQQTAFNTFNNHSNFDPKTYVDLPLKFPLSVTDHAFQNLPKSSTGSVSVHDLNRFIETYFEGAGDDLVYFDPEDFVPVPEDFLPKVKNPEVRAWAIKVHSLWKNLSRKVSSEVKTHPEFHTLLPVLDSVVIPGSRFREVYYWDSYWVIRGLLASKMYKTAKGIVNNLISFIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIHHRTGDVELVKRSLPALLKEHEFWNSDIHKVTVSDAQGCTHTLNRYYARWNKPRPESSIMDKASASKFTTVSEKQQFYRELASAAESGWDFSTRWMRHPPNFTTLSTTSVIPVDLNAFILGMELNIAFFANVTGDHITAKHFLQISDVRKEAINSVFWNANMKQWLDSWLSNTTHEKVHDWDTLHQNQNVFASNFVPLWMKPFYSDASLVGNVLKSLKTSGLLRAAGIATSLTDSGQQWDFPNGWAPLQHMLVEGLVKSGLEEARSLAEEIAIRWITTNYIVYKKTDVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRKIEC 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05545 554 ProSitePatterns Trehalase signature 2. 455 464 IPR018232 GO:0004555|GO:0005991
Trre8g05545 554 Gene3D - 17 552 IPR012341 GO:0005975
Trre8g05545 554 PRINTS Glycosyl hydrolase family 37 signature 260 277 IPR001661 GO:0004555|GO:0005991
Trre8g05545 554 PRINTS Glycosyl hydrolase family 37 signature 327 344 IPR001661 GO:0004555|GO:0005991
Trre8g05545 554 PRINTS Glycosyl hydrolase family 37 signature 190 208 IPR001661 GO:0004555|GO:0005991
Trre8g05545 554 PRINTS Glycosyl hydrolase family 37 signature 295 312 IPR001661 GO:0004555|GO:0005991
Trre8g05545 554 PRINTS Glycosyl hydrolase family 37 signature 528 541 IPR001661 GO:0004555|GO:0005991
Trre8g05545 554 PRINTS Glycosyl hydrolase family 37 signature 370 386 IPR001661 GO:0004555|GO:0005991
Trre8g05545 554 PRINTS Glycosyl hydrolase family 37 signature 448 464 IPR001661 GO:0004555|GO:0005991
Trre8g05545 554 Pfam Trehalase 30 545 IPR001661 GO:0004555|GO:0005991
Trre8g05545 554 SUPERFAMILY Six-hairpin glycosidases 28 547 IPR008928 GO:0005975
Trre8g05545 554 PANTHER TREHALASE 10 552 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05545 Trre-Chr8 57032282 57037679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05545 4 554 Trehalose Biosynthesis Gene Families AT4G24040 57.581 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05545 K01194 - gmx:547539 937.176