Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05464 ATGAACGACGCTGATGTCTCGAAGCAAATCCACCAGATGGTGAGGTTTATTCAGCAAGAAGCTGAAGAAAAAGCTACCGAGATCTCTCTCTCTGCCGAAGAGGAATTCAATATCGAGAAGCTTCAATTGGTCGAAGCCGAGAAGAAGAAGATCAAGCAAGAATACGAACGTAAAGAGCGCCAAATTGAAATTCGAAAGAAGATTGAGTACTCAATGCAGCTGAATGCTTCTCGGATCAAAGTTCTTCAAGCTCAAGATGACATTGTTAATTCAATGAAAGAAGTTGCAGCCAAGGAACTTTTGAATGTGAGCCATCATCACCTTGTTGAGGATATTTTGCATGTGGGCCATCATGAGTACAGAAACCTTCTAAAAGGTCTCATTGTTCAGAGTTTGCTAAGACTGAAAGAACCTTCTGTCTTGTTGAGATGTCGGAAACATGACTTGCACATGGTAGAACATGTGCTTGATGAAGCTGCACAGGAGTATGCTGAAAAAGCAGGTGTTCATCCTCCAGAGATCATTGTTGACCACGATGTCTATCTTCCACCAGCACCCAAGCATCACAAAACTCACAATCCCTACTGCTCTGGTGGGGTGGTGTTGGCTTCTCGTGATGGAAAGATTGTGTGTGAAAATACTCTTGATGCACGACTGGATGTAGTGTTCCGTCAAAAGCTTCCAGAGATTCGAAAACAGCTCTTTGGACAAGTTGCTGCTTGA 723 0.4329 MNDADVSKQIHQMVRFIQQEAEEKATEISLSAEEEFNIEKLQLVEAEKKKIKQEYERKERQIEIRKKIEYSMQLNASRIKVLQAQDDIVNSMKEVAAKELLNVSHHHLVEDILHVGHHEYRNLLKGLIVQSLLRLKEPSVLLRCRKHDLHMVEHVLDEAAQEYAEKAGVHPPEIIVDHDVYLPPAPKHHKTHNPYCSGGVVLASRDGKIVCENTLDARLDVVFRQKLPEIRKQLFGQVAA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05464 240 Gene3D - 1 62 - -
Trre8g05464 240 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 237 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trre8g05464 240 Coils Coil 38 68 - -
Trre8g05464 240 Pfam ATP synthase (E/31 kDa) subunit 16 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trre8g05464 240 Gene3D - 94 239 IPR038495 -
Trre8g05464 240 SUPERFAMILY V-type ATPase subunit E-like 107 236 - -
Trre8g05464 240 Hamap V-type proton ATPase subunit E [atpE]. 8 236 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05464 Trre-Chr8 56456862 56460336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05464 1 240 Primary Pumps ATPases(2) AT4G11150 72.083 1.99e-122 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05464 K02150 - gmx:100500452 393.275