Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05452 ATGAGCTCAACCGATGCGAATAGACAACGAGGTTCATCAACAATGGTGGAGTGCAAACCTCAATGTAAAGCACTTTTATTTTTGACATACCAGAGTTTGGGCTATCTGTTTGGTGACATAAGCCTCTCCCCACTTTATGTCTATCAAAGTATATTTTCTGGAAGACTGAATCATGTTCAAAATGAGGATGCAATATTTGGTTCATTTTCTTTGATTTTTTGGTCTCTCTCTATTATTTCTTTGTTGAAGTATGTTGTTTTCATGTTGAGTGCAGATGATAATGGTGAAGGGGGAACTGTTGCTTTGTATTCACACCTTTGCAGAAATGCAAAATTTTCTTTGCTACCTAATCATCAAGCATCTGATGAAGAGCTCTCTACATATCGCAAACCTGGTTACTCAAATAGAAATATACCACCCTCATCTTTGAAAAGATTCATTGAAAAACATAAGAGCACAAAAATTGTTTTGCTTAGTTTTGTTTTACTTGGTGCTTGCATGGTAATTTGTTATGGTGCACTCATGCCTGCCATTTCAGTTCTTTCTTCTGTTGAAGGGTTGAAAATTGAAGCGAAGATTAAAAACAATAGTATGGTGCCTCTTATTTCTTGTGTTCTACTGGTTGGACTATTTGTTCTGCAACACCGTGGCTCCCACAGGGTCGCCTTCATGTTTCCTCCCATAATCATCCTATGGTTACTGTCTATTTTCATGATTGGCATTTACAATGTCATCAAGTGGAATCCAAGAATATATCAGGCTCTTTCTCCATATTATATATACAAATTCTTTTCGGTTACAGGAAAAGATGGTTGGACTAATCTTGGAGGCGTATTTTTGTGTGTTACAGGGACTGAAGCTATGTTTACAGACCTTGGGTACTACAAACAAGCCCCTGTAAGGGTTGCATTTTCTTGTGTCATTTACCCATGTCTAATTCTTCAGTACATGGGGCAGGCTGCTTTTCTATCAAAGAATTTATCAGCAGTACCTATAAGCTTTTATGCTTCTATTCCAGATGTCCTCTTTTGGCCGGTATTTGTGGTGGCTGCTTTGGCAGCAATAGTTGCAAGTCAGGCTGTCATCTCTTCGACATTCTCAATTGTCCAACAATGCCATGCATTTGAATGTTTCCCTCGTATTAAGGCAGTACATTCCAGAAGGTGGATTAATGGTCAGACATATATACCAGAGATAAACTGGATTCTTATGGTAATCAGCTTGGTTGTGACAGTTGGGTTTGGAAACACGACCCATATAGGATATGCTTATGGGATTGCATGTCTGATTGTGGGATTTGTGACTACATGGTTGACATCACTTGTCATCAACCTTGTATGGCATCGAAGTCTTATAGTTGCTGTGGCATTTCTCTTATTCTTTGGTTCGATAGAGGTTCTCTTTCTTTCATCTTATTGCATGAAAATCCCAAATGGTGGCTGGCTTCCAATTGTGCTCTCTGCAGTCTTCATGGTTGTTATGTATGTGTGGCATTATGGTTCTAGAAAAAAGTATTTCTTTGATATGCATAGCAAAGTTTCAATGAGGGGGATCCTTACATTGGGTCCTAGTCTTGGGATTGTTAGGGTCCCAGGGATGGGACTTATCTATACCGAATTGGCTACTGGAGTCCCTGCCAGTTTCACTCATTTCTTGACAAATCTACCAGCTTTCTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTGCCTGTGCCTTCTGTGCCCCATGCAGAACGTTATCTCATTGGCCGAATTGGTCCGAAATCCTATCGGTTGTATCGGTGCATTGTTCGACATGGTTACAAAGATGTTTATAGCCATGAAATCGATTTTGAAAATGAACTGGTGATGAGCATAGCAGAATTCATTCAATTGGAAGCTGAAGGTTGTTCTGGAAACCTAGATGGTAGTGCAGATGGTCGTATGGCAGTCGTTAGGACGTCTGGGAAGTTTGGAACAAGATTGCGAATGTCAGAATCTGCTGGTGTTGAAGAAAGCGACAGTAATAATTTTCCCGGAGCTTTGACTGTTAGTAGCAGTAAATCTCCGACGTTGAAGAAGCTGCAGGCCATGTATGAGCAGGAATCACCGGAACTCAACAACACTAGAAGGCGGATTAAATTTGAGGTTCTAAATACAATATATAGAGATCCGCGTGTCAAGGAAGAGCTCATGGAACTTGTGGAAGCCAAGCGTGCTGGAGCTGCATATGTAATAGGTCATTCTCATGTAAAGGCCAAGTGGAATTCTTCCTTTGTGAAGAAGTTTGCTGTAAACCTCTACTCTTTTCTTCGAAAAAATTGCCGCTCCCCTGCTGTTGGACTAAATATTCCCCAGACTTGTCTGATTAAGGTAGGAATGAATTACCATGTCTAG 2379 0.4035 MSSTDANRQRGSSTMVECKPQCKALLFLTYQSLGYLFGDISLSPLYVYQSIFSGRLNHVQNEDAIFGSFSLIFWSLSIISLLKYVVFMLSADDNGEGGTVALYSHLCRNAKFSLLPNHQASDEELSTYRKPGYSNRNIPPSSLKRFIEKHKSTKIVLLSFVLLGACMVICYGALMPAISVLSSVEGLKIEAKIKNNSMVPLISCVLLVGLFVLQHRGSHRVAFMFPPIIILWLLSIFMIGIYNVIKWNPRIYQALSPYYIYKFFSVTGKDGWTNLGGVFLCVTGTEAMFTDLGYYKQAPVRVAFSCVIYPCLILQYMGQAAFLSKNLSAVPISFYASIPDVLFWPVFVVAALAAIVASQAVISSTFSIVQQCHAFECFPRIKAVHSRRWINGQTYIPEINWILMVISLVVTVGFGNTTHIGYAYGIACLIVGFVTTWLTSLVINLVWHRSLIVAVAFLLFFGSIEVLFLSSYCMKIPNGGWLPIVLSAVFMVVMYVWHYGSRKKYFFDMHSKVSMRGILTLGPSLGIVRVPGMGLIYTELATGVPASFTHFLTNLPAFYQVVVFVCVKTVPVPSVPHAERYLIGRIGPKSYRLYRCIVRHGYKDVYSHEIDFENELVMSIAEFIQLEAEGCSGNLDGSADGRMAVVRTSGKFGTRLRMSESAGVEESDSNNFPGALTVSSSKSPTLKKLQAMYEQESPELNNTRRRIKFEVLNTIYRDPRVKEELMELVEAKRAGAAYVIGHSHVKAKWNSSFVKKFAVNLYSFLRKNCRSPAVGLNIPQTCLIKVGMNYHV 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05452 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre8g05452 792 NCBIfam potassium uptake protein 28 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre8g05452 792 Pfam K+ potassium transporter 30 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05452 Trre-Chr8 56340690 56349830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05452 15 792 Inorganic Solute Cotransporters AT4G23640 61.538 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05452 K03549 - gmx:100819743 1333.93