Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05437 ATGGATGAGCTTGCTTTCTTAATGGATTGGGATTTGGATGCTATCAATGAATTAGCTCCAACTTCAACAAACAATCCTTATTTTTCTCATTTATTTTCTGAACAAGATGATGAGTTATTATTATTTGGAAATTTTCCTGAATTTTCAAAAACCAAAAATGCCCTTATTGATGAATTTGAAGAACTTTGCAAACCTTGCTACCCTCTTTCACCTCAAACCATCGTTACAACAAGTTCTCTTACTACTATTGTCCCCAGAGAGTCTCATCATGAAGTCAAAGAAATTAAACCATTAAAGATAGTAGCTTCTCAAGATTTGCAAGTTCCTGCAGTACCTAAATGTAAAAAAAGCAAGAAAAACAAGAACAAGAATATTGTGAAGAAAGTAACAGCAGTGGATGGTACTCTTTGTGATGCATGGGCATGGCGAAAATATGGACAAAAACCAATAAAGGGTTCACCTTATCCACGAAGTTACTATAGATGTAGCAGTTCTAAAGGATGTTTAGCAAGAAAACAAGTTGAAAAGAATCATTTAGATCCAAAAGTTTATTTGGTTACATACACTGCAGAACATAATCATCCTCAACCAACTCGAAGGAACTCGTTAGCCGGAAGCACTAGGAAGAACAATAATCTCTTGGTTGAACATTCTTCTAGCACATTAACTCGTGCCCAAAAAACTTGTTCTATAAATTCATTAGTAGTAACTCACTCTCCAAATACACCTTTGGTGAAAATTGAAGAAGAGGTAAGTATGCAAGAACAAAGTAATGGAATATTGGAGGATGTGGAAGATCATCATCTTCTTGAATGGTTGGATGGTGCTCAATTATGTGATGATGGTTGGATTCCAAGTAAAGAGCTAGAGGAATTTATTGGATTAGATAATAAGTACCAATAA 903 0.3477 MDELAFLMDWDLDAINELAPTSTNNPYFSHLFSEQDDELLLFGNFPEFSKTKNALIDEFEELCKPCYPLSPQTIVTTSSLTTIVPRESHHEVKEIKPLKIVASQDLQVPAVPKCKKSKKNKNKNIVKKVTAVDGTLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVEKNHLDPKVYLVTYTAEHNHPQPTRRNSLAGSTRKNNNLLVEHSSSTLTRAQKTCSINSLVVTHSPNTPLVKIEEEVSMQEQSNGILEDVEDHHLLEWLDGAQLCDDGWIPSKELEEFIGLDNKYQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05437 300 Gene3D WRKY domain 118 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g05437 300 ProSiteProfiles WRKY domain profile. 131 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g05437 300 Pfam WRKY DNA -binding domain 138 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g05437 300 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 100 245 IPR044810 GO:0003700
Trre8g05437 300 SUPERFAMILY WRKY DNA-binding domain 135 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g05437 300 SMART WRKY_cls 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05437 Trre-Chr8 56213859 56215417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05437 9 297 WRKY Transcription Factor Family AT4G01250 36.275 1.97e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre8g05437 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05437 K13426 K13425 gmx:102667104 241.506