Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05392 ATGGAGAGAAGATCTCCTCCTCTGGTCAACCAAAAATGCACGTCGCGGATGTTTGGAATCTTCAACTTTCGTGAAGCTCATTCGGATGAAACATTGGTTTCCGATAGGCGGCATTTGAATAAACACGCCGGTGGAAATGGAAAATCCAGAATTAGTTCAGATGTGCTTAGCACAGTTGATGAAAAGTACCCTCATGCCGATGTAAGTTCAAGAAGAAGAGGTTATAGTTGTAAGAGTATTTGTGTGGAGAATGATCAGATAGCAAATTTGGAAAATGAAGCGACAAAAATGATTGTTAACCAGAGATTTTTCGACAAAAACTCTCAAGGCAAAGATGGTGCGGACTCTCAGCCTAATCAATTTTTGGATGCTGTACAGATTTTATATTCGAACAAGGAACTTTTCACAAAACTTCTGCAAGATCCAAACTCGCTAGTGGTAAAACATATTCATGGCTTACAGAAATCTCAAGTAAAAGCAAAACAAAATGGAATGAACAGATTGAATAAAGATCAAAACAGTAGTAATTTTGATAGGTGCAATTTGAGTAAAAATTGCGAGTCACGGTCCTCTGAGAGAATAGTAGTTTTGAAGCCTGGCACAAATAATGCGAAAAAATGTGCTGACAATAGAGATGCTCAAAATATGAAGCCTTCACATTTTGCATTTGGTGGTATAAAGAGAAAGTTGAGATATGTCATGAGAGTAAGGAAAAAAGGGCAACCGTGGATGGCAACTGATTCGGCGCCAAGTAAATTTCGATGCTGTTCGCAGAACTTGGAAGATGGTAAAAATGTAGAAAAATTGGACACTGCCGTAAGAAGTTCGCTAAATAATGTCCATACTGGAAAATTTTTGAAGGATTCCAGGTTGAAGTATCCTGAGTTGAGTGTGAGACAGGAAGTTGCTTCTGAGCAAAATAAATTGACGAAGAAGGACCAAGGTACAGAAGTTACATCTCATAACAAACACCAAATGGTTCTCAAAACATTTCATAGAGATGGAGAAAGTTGTTCTTATACAAGTTCTTCTTCTCAGAAAATCAAGGATCCACCAGTAGCCACTTTTAGTGATGAGTTGCAGGTTTTTGATGCGGCAGATATTAGTGTCAATACGAATCTTCCTGGCGACAATTTACATGCACATTATGATATTCCAAGAGATGGATTACTAGTACAAGTTACACATGATGAATTTAAAGATAACAACCTTGTAACATCCTCTTTGGATCCAATGAACAGCTCAAAGGACATCATAAGGGAAGTTCTGGAGGATTTCAGCTTGAAATGTGATGAACCTGTGAAGAGTCATTTATCAAACCTATTGAATGATTCATCCACTTTTCATGAACTGAAGGGATTAACTGACCATCTTTCTGGCAGTAAAATCCTGCGTGACTGTATCATCGAATGTTTCGTGGAGTTATATCAAAACTGTGATTTCCAACCTCATTATTCATCAAGAAATCCCAACTTTCAATCATGCGTTGCGAGGAAAATTTTGGTTAGAGAGATTAATGAACTTGTTAACCTGCACTTTTTCCCTCATCCATCGCCAATAAAGTTACAAAAACTTGTTGAAATGGACTTAGCAAGACGTGGATCATGGTTGAGTGATATCCAAGTTGATATAGAAGACATTGCAATTGAGGTGGAGAAAGATGTTTTGGAAAAACTGGTGTTAGAAATAGTTTCTGAGATGGATATCAGAGACTTGATACAATGCAATTAA 1731 0.3755 MERRSPPLVNQKCTSRMFGIFNFREAHSDETLVSDRRHLNKHAGGNGKSRISSDVLSTVDEKYPHADVSSRRRGYSCKSICVENDQIANLENEATKMIVNQRFFDKNSQGKDGADSQPNQFLDAVQILYSNKELFTKLLQDPNSLVVKHIHGLQKSQVKAKQNGMNRLNKDQNSSNFDRCNLSKNCESRSSERIVVLKPGTNNAKKCADNRDAQNMKPSHFAFGGIKRKLRYVMRVRKKGQPWMATDSAPSKFRCCSQNLEDGKNVEKLDTAVRSSLNNVHTGKFLKDSRLKYPELSVRQEVASEQNKLTKKDQGTEVTSHNKHQMVLKTFHRDGESCSYTSSSSQKIKDPPVATFSDELQVFDAADISVNTNLPGDNLHAHYDIPRDGLLVQVTHDEFKDNNLVTSSLDPMNSSKDIIREVLEDFSLKCDEPVKSHLSNLLNDSSTFHELKGLTDHLSGSKILRDCIIECFVELYQNCDFQPHYSSRNPNFQSCVARKILVREINELVNLHFFPHPSPIKLQKLVEMDLARRGSWLSDIQVDIEDIAIEVEKDVLEKLVLEIVSEMDIRDLIQCN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05392 576 Pfam Domain of unknown function (DUF4378) 421 562 IPR025486 -
Trre8g05392 576 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 82 - -
Trre8g05392 576 Pfam Protein of unknown function (DUF3741) 100 144 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05392 Trre-Chr8 55822995 55825371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05392 455 574 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 35.833 1.01e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05392 - - tpra:123915942 998.808