Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05384 ATGCATTGGGAGCAGGAGGGAGGGGGAAAAGGGGGAACTGTGAATCAAGTTGAAGAAGGTAGCCGGCTTGCGCTACTGATAGAGTGGATAAATGCCGTGCTTCCTAACTTTAATCTGCCTTTAGAAACTTCCGAGGAGGAATTGAGGGAATGCTTGAGGGATGGATCAGTATTATGTAGCATTTTGGACAAGTTGGTTCCTGGTTCACTGGAGGGAAGCAGTTCTTTGGATGAGCCGGTGGATGTTGAAAGGTTTCTGGTGGCCTTGGATGAACTTGGATTGTCAGGATTTGAAATTTCAGACCTAGAGCAGGGATCTATGGTGCCTGTGTTGCAGTGCCTTGAAAATCTGAAAGCTCACTTTGTATATAATGCTGTACGAGAAAATATCCGAGGTTGTTCTAGGAAGAGGTGGGACCAGCCGAGCCTAACACCCCTAGAAGAAACTGATAGTTGCCTCAAGGATGCTTCAAATTTCCAACATGCTGTTGATGGCTCTGTTGTATCAGATGGAATCGCTTCCATCGATAATATTGGATTCAAGTCTAATGAACTGTTGCAGTTGAAGCAAGGACTGCACATGGATCTTTCAGATGCTAAACTTAATGAATTATTAAAATCAAACAATTTGGACAGTGTTTCAACTCGATTTCTTTTTAACATAGTAAATAGGATCTTAAGTGATATCTTTGAAAGGAAGAATGGAGATATACCTCAAGCTCAACGTACAGCATGCCTGCTGAGGAAAATTCTGCAAGTAATTGAGTTACGCTTTTCAAATCAAGCGGAAAGCATGAAAAGTCAAAACAATATTTTCAAAGCTCGTGAGGGAAAGTATCAAACAAAAATAAATGCGCTTGAAACCTTGGCGGTAGGGACAACCGAAGAGAATGAGGTTGTGACAGGTTGGGTTCAGCAGTTGAAGTTTTCTTTGCAGCATGAGCAAAATAAATTTGAGGAGATGAAGAAACTTGAAGAGCAGGATTTTTCTCGATTGAAGAAAGACAAAGTTCGCAGTGAAATTGAAATTTCTCAAATGAAGCAAGATTTGGAAATGATGAAAAGATCACATGAAGACCATGTTTTGCAGTTAGAATTGCAAGCTTCTGAATCTAAAGCTGAGTATGAGAAAAGGATACGGGAACTTAAATGTCAGCTGGCTGATGCGAGGAAGCAAGTGAAGGAACTGGAGGCATTTTCGGAATCCAGATATTTGAATTGGAAGAATAAAGAGCATACTTATCAAAGTTTTTTAAATCAACAATTTGGAGCTTTCAAGGAATTGAAAGCTGTCATGAAATCTGTCAAAGATGAAGTGATTAAAACAAAAAGAAGCTACTTAGAGGAATACAAGTATTTTGGGATCAAACTCAAAGGTCTAGCTGAGGCTGCAGATAATTATCATGTTCTTCTAACAGAAAATAGGAAATTATATAATGAAGTGCAAGATTTGAAAGGAAATATCAGAGTATATTGTCGAGTTAGACCATTTCTTTCGGGGCAAAGTCAGAAGCATACATCAGTTGAGTTTATTGGTGATGATGGAGAACTAATTATTAGCAATCCTCTTAAACAAGGAAAGGAAAGCCGCAAGCTTTTTAAATTTAATAAGGTTTTTGGTCAAGCAGCAAGTCAGGAGGAAGTATTCTTGGACACTCGTCCGCTAATTCGTTCTGTTCTTGATGGGTTCAATGTTTGTATATTTGCTTACGGTCAAACTGGCTCGGGAAAGACTTATACCATGAGTGGACCTAGCTTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGAGTAGGAAAAGTTCTATTGATTACGAAATTGGAGTTCAAATGGTTGAGATTTATAATGAACAAGTTCGTGATTTACTATCAAGCAACGAAATAAAATATATGAAGTTTCTTTTCCTTGACTTGCACACACTTGGGATTTGGAATACTACCAAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTGAATTCAATGAAAGATGTTCTTGAGTTGATGAACATTGGGTTGATGAACCGGGCAACTAGTGCCACTGCCTTAAATGAAAGAAGCAGTAGATCACACAGTGTTCTCTCTATTCATGTTCGAGGAACGGAAGTGAAGACCAACACTCTGTTGCGTGGATGTCTGCATCTTGTAGACCTTGCGGGAAGTGAAAGAGTGGATCGTTCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAACATATAAACAAATCACTATCGGCGCTCGGAGATGTTATATTTGCTCTGGCTCAAAAGAGCCCGCATGTGCCATATAGAAATAGTAAATTGACTCAACTCCTTCAGAGTTCGTTAGGTGGTCAAGCAAAAACCCTTATGTTTGTACAACTTAATCCCGATGTTGCTTCATACTCTGAAACTATAAGCACTTTGAAGTTTGCTGAAAGGGTTTCTGGTGTTGAGTTAGGCGCGGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTAATGGAGCAGATGGCATCTCTCAAGGACACTGTGGCAAGGAAGGATGAAGAGATTGAGCGGTTGCAGTTGCTCAAGTCTAATCATAACGGTGCAAAACTTGGAATGACCTCACCAAGACATGCACCCTTATCACCAAGACATGCCCCATTATCACCAAGACATGCACCATTATCACCAAGGAGACATTCCATAGGGACTCCCCGCAACAGTCCCCGCAACAGCATGAGACTTTCTGGAACAAGGAGCCTTGGAGTCGATGGAAAAGTAGCTTATGATATGGATAATGGCTCAGAGTACAGTGATAAGCATTCTGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCGAGTTCCCTTCAGTTGAAATTAGCTCGAGAAGACATCGATCAAAATTTTAATGACGACATTGATCTCTTAGGATTTGGAGATGCAGATTCAGAGGAGAGATTAAGTGACATATCTGATGGCGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTAGAGTACACTCTTTTCCCTGATCTAGAGAAGGCAGCTGAAATTACACCAGCTAAGGATACAGCATCCAACAACCTTCCACCTCAGAGCACAGAAAAGTCCGCTGTGCCATCAAGAATTCCCAAAGCTCCGCAAGTCCAGTCAAAATTGCCCACAAGAACTTCAAGGCTATCACTGAACAGAAGTACCTCAAAGGTTTCTTCAAGTATTAAAAAACCCACAGCCGGTGGCTCTTCATCGGCGAGGTCCTCTAAACGATGGCAATAG 3312 0.4106 MHWEQEGGGKGGTVNQVEEGSRLALLIEWINAVLPNFNLPLETSEEELRECLRDGSVLCSILDKLVPGSLEGSSSLDEPVDVERFLVALDELGLSGFEISDLEQGSMVPVLQCLENLKAHFVYNAVRENIRGCSRKRWDQPSLTPLEETDSCLKDASNFQHAVDGSVVSDGIASIDNIGFKSNELLQLKQGLHMDLSDAKLNELLKSNNLDSVSTRFLFNIVNRILSDIFERKNGDIPQAQRTACLLRKILQVIELRFSNQAESMKSQNNIFKAREGKYQTKINALETLAVGTTEENEVVTGWVQQLKFSLQHEQNKFEEMKKLEEQDFSRLKKDKVRSEIEISQMKQDLEMMKRSHEDHVLQLELQASESKAEYEKRIRELKCQLADARKQVKELEAFSESRYLNWKNKEHTYQSFLNQQFGAFKELKAVMKSVKDEVIKTKRSYLEEYKYFGIKLKGLAEAADNYHVLLTENRKLYNEVQDLKGNIRVYCRVRPFLSGQSQKHTSVEFIGDDGELIISNPLKQGKESRKLFKFNKVFGQAASQEEVFLDTRPLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQSRKSSIDYEIGVQMVEIYNEQVRDLLSSNEIKYMKFLFLDLHTLGIWNTTKPNGLAVPDASMHSVNSMKDVLELMNIGLMNRATSATALNERSSRSHSVLSIHVRGTEVKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQMASLKDTVARKDEEIERLQLLKSNHNGAKLGMTSPRHAPLSPRHAPLSPRHAPLSPRRHSIGTPRNSPRNSMRLSGTRSLGVDGKVAYDMDNGSEYSDKHSEAGSHQSMDDFRNKSSSLQLKLAREDIDQNFNDDIDLLGFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPDLEKAAEITPAKDTASNNLPPQSTEKSAVPSRIPKAPQVQSKLPTRTSRLSLNRSTSKVSSSIKKPTAGGSSSARSSKRWQ 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05384 1103 PANTHER KINESIN-LIKE PROTEIN KLP-3 345 1070 IPR027640 GO:0003777|GO:0007018
Trre8g05384 1103 MobiDBLite consensus disorder prediction 1032 1103 - -
Trre8g05384 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 862 IPR027417 -
Trre8g05384 1103 Gene3D Kinesin motor domain 428 826 IPR036961 -
Trre8g05384 1103 Pfam Kinesin motor domain 493 822 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05384 1103 Pfam Calponin homology (CH) domain 26 121 IPR001715 GO:0005515
Trre8g05384 1103 Coils Coil 365 399 - -
Trre8g05384 1103 MobiDBLite consensus disorder prediction 1060 1103 - -
Trre8g05384 1103 Coils Coil 838 865 - -
Trre8g05384 1103 ProSiteProfiles Calponin homology (CH) domain profile. 20 122 IPR001715 GO:0005515
Trre8g05384 1103 MobiDBLite consensus disorder prediction 904 921 - -
Trre8g05384 1103 MobiDBLite consensus disorder prediction 936 953 - -
Trre8g05384 1103 SMART kinesin_4 485 832 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05384 1103 Gene3D - 21 122 IPR036872 -
Trre8g05384 1103 PRINTS Kinesin heavy chain signature 694 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05384 1103 PRINTS Kinesin heavy chain signature 774 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05384 1103 PRINTS Kinesin heavy chain signature 725 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05384 1103 PRINTS Kinesin heavy chain signature 562 583 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre8g05384 1103 MobiDBLite consensus disorder prediction 1033 1051 - -
Trre8g05384 1103 MobiDBLite consensus disorder prediction 870 957 - -
Trre8g05384 1103 SMART ch_5 22 120 IPR001715 GO:0005515
Trre8g05384 1103 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 429 826 - -
Trre8g05384 1103 SUPERFAMILY Calponin-homology domain, CH-domain 18 121 IPR036872 -
Trre8g05384 1103 ProSiteProfiles Kinesin motor domain profile. 487 824 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05384 Trre-Chr8 55778515 55785102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05384 455 858 Calmodulin-binding Proteins AT5G65930 37.931 3.53e-71 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05384 K10406 - gmx:100812813 1687.93