Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05382 ATGTCTGGATGCAATAAATCACCTAAAAATGATCAACATTCGATTAAATATCGGTGGATTCAACACGGAGGGGCATCCTCTAAGGCTGCTGATATTTCTCGTGTAGATTGTTCGCCTCCTCTTTCCAATAATGAGAACAAACAATGCTATAGAAGTTCTCAACTGAATCCCCCTGAGATACTCACCACGCCGCAGCTCATCTCTGCAATAGGCCAGTTATGGGATTCTGCTAGTCGTCCACTTTCATTTTTACTCCCGAAGGAAAATGTGAATAAAGATGATAAAGGATTCTCAAAAGAGAAAATTTTGGGTAACATTCATGAGAGTAAAAATGGTGTGGTTACTTCAAATAACACTAATTACTATTCTGTTAATCCGAGTGATACTTGCTTCAATTCACAAATTGTGCAGGAAAAATTGGATTTCCCTAAGGCAAGCGATAAAAATTCAAATGAATATTGTGATAAACTTGAACTTGGGAGTGAAGAAATTTCGTTTAGATCAGGAAATGTTCCTAGTGAGCTAAACTGTCGTGCAAAGGTTACTGTGCCTGAGAACCTGAAAACTAATTCTTTGGTTGCCAGGGACTGCATTTCAATAGACGCAGTCCCCACTTCATTGGCTAATGAAAGAGATGTATGCAATCCTGATGTACTCGTCCGTGAAGCTCCGGCATTATCTAACGGTGCAGTTTTGAACACAAAAGAAGTTAACCCTCTGTGTTCAGACTATTTTCTTCAAATTGTGCCTGATAATCAGATGGATGTTGATGCTTGTCAAACCCTATCTTCTAGTATCTATGCAGACTATCATATTATCAACTCTTTAGCTACCTGTAACACTGCTTCTGTGCAGTGCCAAAGTAAGCTTGATGATAATGAATTAATGGAAATTCAAAAAAGCCATTTATCACATATAACCGATGATGAACCTAAGCTTCAGATCTTCTCTGCAACTAATCGGAAGCCTTCCCATTCCCTAGCCAAGCAAGAACATGCTTTTTCTGGGGCATTGGCTGGAATATGTGTCAGCTGTTGTCTGCATCCTGTTGACACAATCAAGACAGTCGTTCAATCATGTCGTGCAGAACAGAGGTCCATCTTTTACATTGGCAAATCAATTGTTTCCGATAGAGGTTTTCCTGGACTATATCGTGGAATTACTACAAACATTGCATGTTCGGCTCCAATTTCTGCAGTTTATACTTTCACGTATGAATCGGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGAATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCCACGTCTTTCATCTTCACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGATCTCATTATCGCAACTGCTGGGATGTATTGATCGGAATTATCAGAAATGGTGGTCTATCCTCACTATATGCAGGTTGGAGAGCTGTACTATGCCGAAATATCCCACATTCAATGATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTTCTAGTATTCAATCCCACACATTTCAGACCTTAGTGTGTGGAGGATTGGCTGGATCAACTGCTGCTTTATTCACAACTCCGTTTGATGTGATCAAGACAAGATTACAGACACAGATTCCTGGATCAAGAAATCAATATGATAGTGTGTTCCATGCCCTTTACAAAATTAGCAAGACCGAAGGTTTGAAGGGGTTATACAGGGGGTTGACTCCAAGGTTGATTATGTACATGTCTCAAGGATCATTGTTCTTTGCTTCATACGAATTTTTCAAGAGTGTATTCTCTCTGGAAGCATCACTTCCCACTGGTTTATAA 1833 0.3993 MSGCNKSPKNDQHSIKYRWIQHGGASSKAADISRVDCSPPLSNNENKQCYRSSQLNPPEILTTPQLISAIGQLWDSASRPLSFLLPKENVNKDDKGFSKEKILGNIHESKNGVVTSNNTNYYSVNPSDTCFNSQIVQEKLDFPKASDKNSNEYCDKLELGSEEISFRSGNVPSELNCRAKVTVPENLKTNSLVARDCISIDAVPTSLANERDVCNPDVLVREAPALSNGAVLNTKEVNPLCSDYFLQIVPDNQMDVDACQTLSSSIYADYHIINSLATCNTASVQCQSKLDDNELMEIQKSHLSHITDDEPKLQIFSATNRKPSHSLAKQEHAFSGALAGICVSCCLHPVDTIKTVVQSCRAEQRSIFYIGKSIVSDRGFPGLYRGITTNIACSAPISAVYTFTYESVKAALLPYLPKENYSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLIGIIRNGGLSSLYAGWRAVLCRNIPHSMIKFYTYESLKQVMPSSSIQSHTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSRNQYDSVFHALYKISKTEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKSVFSLEASLPTGL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05382 610 ProSiteProfiles Solute carrier (Solcar) repeat profile. 420 503 IPR018108 -
Trre8g05382 610 Gene3D Mitochondrial carrier domain 422 609 IPR023395 -
Trre8g05382 610 Gene3D Mitochondrial carrier domain 301 421 IPR023395 -
Trre8g05382 610 Pfam Mitochondrial carrier protein 422 505 IPR018108 -
Trre8g05382 610 Pfam Mitochondrial carrier protein 512 601 IPR018108 -
Trre8g05382 610 Pfam Mitochondrial carrier protein 331 412 IPR018108 -
Trre8g05382 610 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 299 603 - -
Trre8g05382 610 ProSiteProfiles Solute carrier (Solcar) repeat profile. 511 599 IPR018108 -
Trre8g05382 610 FunFam Mitochondrial substrate carrier protein-like 305 453 - -
Trre8g05382 610 SUPERFAMILY Mitochondrial carrier 331 596 IPR023395 -
Trre8g05382 610 ProSiteProfiles Solute carrier (Solcar) repeat profile. 327 411 IPR018108 -
Trre8g05382 610 FunFam Mitochondrial substrate carrier protein-like 454 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05382 Trre-Chr8 55768867 55776786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05382 310 600 Chloroplast and Mitochondria Gene Families AT1G07030 33.660 3.27e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05382 - - gmx:100812271 842.802