Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05366 ATGAAGCTGAAAGTGTATGCGGACCGTATGTCCCAGCCATCTCGTGCGATTCTTATCTTTTGCAAAGTGAATAAAATAGATTTCGAAGAGATCCATATCGAACTCTCCAAACGTCAGCAATTATCTCCCGAATTTCAAGCGATTAACCCTTTCAAGAAAGTCCCTGCTATTGTCGATGGAAGGTTCAAGCTATTCGAGAGTCATGCAATTCTTATCTATATTGCTTCTGCATTTCCTGGAGTTGCAGACCATTGGTATCCAGCTGATGCTTCCAGGAAAGCTAGAATTCATGCAGTCTTAGATTGGCATCACCTGAATTTGCGCCGTGGAGCAGCCGGGTTTGTTCTAAATACTGTACTAGCTCCATTATTGGGTCTACCACTAAACAAACAAGCAGCTGCCGAAGCCGAGAAAGTTTTGACATCATCTCTGTCCACAATAGAGAACATTTGGCTTAAGGGTGACGGACAATACTTGCTTGGTGGCTTCCGCCCTTCCATAGCAGATCTAAGTCTGGTCTGCGAAATTATGCAATTACAGCTTTTAGATGAGAAGGAGCATGATCGTATTCTTGGCCCGCACAAGAAAGTTCAGACGTGGATTGCAAGCATAAGAAATGCAACAAAACCACATTTTGATGAAGTTCATAATGTCCTCTATAAGCTCAAACTGAGGCTTTCATTGAAGCAATCTAGTCAGGCAGATGGGGAAAGGAAATCTGAGATTAAAGGCCCCATAATTTCAAAGATGTGA 753 0.4263 MKLKVYADRMSQPSRAILIFCKVNKIDFEEIHIELSKRQQLSPEFQAINPFKKVPAIVDGRFKLFESHAILIYIASAFPGVADHWYPADASRKARIHAVLDWHHLNLRRGAAGFVLNTVLAPLLGLPLNKQAAAEAEKVLTSSLSTIENIWLKGDGQYLLGGFRPSIADLSLVCEIMQLQLLDEKEHDRILGPHKKVQTWIASIRNATKPHFDEVHNVLYKLKLRLSLKQSSQADGERKSEIKGPIISKM 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05366 250 Gene3D Glutaredoxin 1 82 - -
Trre8g05366 250 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Trre8g05366 250 FunFam Glutathione S-transferase theta-1 83 231 - -
Trre8g05366 250 CDD GST_C_Theta 92 222 IPR040077 -
Trre8g05366 250 SUPERFAMILY Thioredoxin-like 1 87 IPR036249 -
Trre8g05366 250 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 238 IPR043377 -
Trre8g05366 250 SFLD Main.4: Theta-like 1 223 - -
Trre8g05366 250 SFLD Main (cytGST) 1 223 - -
Trre8g05366 250 Gene3D - 83 247 - -
Trre8g05366 250 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 224 IPR010987 -
Trre8g05366 250 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Trre8g05366 250 CDD GST_N_Theta 3 78 IPR040075 -
Trre8g05366 250 SUPERFAMILY GST C-terminal domain-like 83 215 IPR036282 -
Trre8g05366 250 FunFam Glutathione S-transferase theta-1 1 80 - -
Trre8g05366 250 Pfam Glutathione S-transferase, C-terminal domain 131 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05366 Trre-Chr8 55669288 55671736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05366 1 223 Glutathione S-transferase Gene Family AT5G41210 70.852 2.97e-122 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05366 K00799 - gmx:547979 411.379