Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05365 ATGATGGGGAAGCTGAAGGTATATGCAGATCGTATGTCCCAACCATCTAGAGCAGTTCTTATATTCTGCAGGTTGAACGGAATTGATTTTGAGGAGATTAAAGTTGACATTTCCAAACGTCACCATCTATCCCCTGAATTCACAGAAGTAAACCCTCTGCAGAAAGTTCCAGCTATTCTTCATGGAAACCTCAATCTCTTCGAGAGCCATGCAATCCTTGTCTATCTTTCTTCTACTTTTCCTGGAATTGCTGACCATTGGTATCCAACTGATGTTTTCAGGAGAGCAAAAGTCAATTCAGTATTGGATTGGCATCACTCTAATTTACGATATGGAGCAGTGAATTATGTAACAAATACTGTATTAGGGCCCGCGCTTGGCCGTCCGCTGAATCTAAAAGCAGCTGCTGACGCAGAAAAAGTTTTATCATCTTCGTTATCAAAACTAGAGAATATTTGGCTCAATGGAGATGGACGATTCCTTCTCGGTAGCTTTCAACCGTCTATAGCAGATCTCAGCCTGGTTTGTGAACTCACACAACTTGAGGTTTTGGATGAGAAGGACTGCGGTCGAATATTATCCCCATACAAGAAAGTTCTTGGGTGGATTGAGGATACAAGAACTGCAACAAATCCCCACTTTGAACAAGTGCATAATATCCTTTATAGAGCCAAAATGAAATTCCAACAGCAGCGTTCAAGGACAGCTGAATCTGGGACTGAGACTAGCAACAACATGGGGAGGCATTCCAAGATGTGA 759 0.4216 MMGKLKVYADRMSQPSRAVLIFCRLNGIDFEEIKVDISKRHHLSPEFTEVNPLQKVPAILHGNLNLFESHAILVYLSSTFPGIADHWYPTDVFRRAKVNSVLDWHHSNLRYGAVNYVTNTVLGPALGRPLNLKAAADAEKVLSSSLSKLENIWLNGDGRFLLGSFQPSIADLSLVCELTQLEVLDEKDCGRILSPYKKVLGWIEDTRTATNPHFEQVHNILYRAKMKFQQQRSRTAESGTETSNNMGRHSKM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05365 252 Gene3D Glutaredoxin 4 83 - -
Trre8g05365 252 CDD GST_C_Theta 94 223 IPR040077 -
Trre8g05365 252 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Trre8g05365 252 CDD GST_N_Theta 5 80 IPR040075 -
Trre8g05365 252 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 4 242 IPR043377 -
Trre8g05365 252 SFLD Glutathione Transferase (cytosolic) 4 233 IPR040079 -
Trre8g05365 252 SFLD Main.4: Theta-like 4 233 - -
Trre8g05365 252 Gene3D - 84 244 - -
Trre8g05365 252 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 228 IPR010987 -
Trre8g05365 252 SUPERFAMILY Thioredoxin-like 2 89 IPR036249 -
Trre8g05365 252 FunFam Glutathione S-transferase theta-1 85 233 - -
Trre8g05365 252 Pfam Glutathione S-transferase, C-terminal domain 136 204 - -
Trre8g05365 252 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Trre8g05365 252 MobiDBLite consensus disorder prediction 231 252 - -
Trre8g05365 252 SUPERFAMILY GST C-terminal domain-like 85 208 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05365 Trre-Chr8 55666037 55668303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05365 2 240 Glutathione S-transferase Gene Family AT5G41210 65.272 4.32e-117 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05365 K00799 - gmx:100799229 432.565