Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre8g05327 | ATGGATTCGTTCCAACCAAACATAGATTCAAACACCTTTCAAGAATTCAATCACAAGAAACGCCGCAAAATCGGAAACCTAACAACCGATCAAAATTCCGTCAATCTTATGCCATGGAGATCCGAATCAGACCAGAACATCTACTCCAAAAAACTCATCGAAGCTTTCCTCCGGATTAATTCACCGGAGACAACCAAACCTAGAGTCGCCGGTCAAGTCCGTGAAACTGCCGATCAAGTTCTCGCCGCAACTGCTAAAGGAAGAACACGTTGCTGCCGCGCGATTCTTGGACGGTGGAAGAAGCTTCGTAGACATCACAGGAAAGTGAAGAAAGCTTGTAGTGGATTAAATAGAACGGGGATTGTTGTTCTTAAGTTATGA | 381 | 0.4436 | MDSFQPNIDSNTFQEFNHKKRRKIGNLTTDQNSVNLMPWRSESDQNIYSKKLIEAFLRINSPETTKPRVAGQVRETADQVLAATAKGRTRCCRAILGRWKKLRRHHRKVKKACSGLNRTGIVVLKL | 126 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre8g05327 | Trre-Chr8 | 55356733 | 55357113 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trre8g05327 | 1 | 97 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G09250 | 36.036 | 1.18e-08 | 49.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre8g05327 | - | - | gmx:100807196 | 129.028 |