Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05323 ATGGAGAGACATGAAGTGATATTTCCTATCTCATCTTCAAAAGATGCTTCTCATATTGATGTTAAACCCGGTAATGCCTCTAATATTCATGTTAAAAGGGCAGAATTATTTCTAAAAACTATAAGGAAGGAGACATCAAAGCAGAAAGGAAGCAAAGAAATCATGAAGCACAAATATGTATTTCAAACAAGGAGTCAGATCGATATACTAGACGATGGGTTCCGATGGAGAAAGTATGGGGAAAAGTCGGTGAAAAACAACAAATATCCTAGAAGTTATTACAAATGCACTTATCGAGGCTGCAATGTAAAGAAACAAATCCAAAGGCATTCCAAAGAGGAGCAGATCGTAGAAACAACTTACGACGGAATGCATATTCACCCTGTCGAGAAGTCAACTGAAAGCTTCGACCAAATCTTGAAAATTTTTATTACAAGCAATCAACTATATAATGTAACAATGTAA 465 0.3548 MERHEVIFPISSSKDASHIDVKPGNASNIHVKRAELFLKTIRKETSKQKGSKEIMKHKYVFQTRSQIDILDDGFRWRKYGEKSVKNNKYPRSYYKCTYRGCNVKKQIQRHSKEEQIVETTYDGMHIHPVEKSTESFDQILKIFITSNQLYNVTM 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05323 154 Gene3D WRKY domain 50 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g05323 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 33 133 IPR044810 GO:0003700
Trre8g05323 154 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g05323 154 Pfam WRKY DNA -binding domain 71 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g05323 154 SUPERFAMILY WRKY DNA-binding domain 62 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g05323 154 FunFam WRKY transcription factor 57 56 130 - -
Trre8g05323 154 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05323 Trre-Chr8 55324455 55325272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05323 58 151 WRKY Transcription Factor Family AT5G13080 64.894 5.93e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre8g05323 WRKY 3.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05323 - - mtr:25502011 252.292