Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05306 ATGGATTTTGTGAAGAAGTGTAAGAGGGCATGTGGAAGCCGCAGTAACAGATTGTATCCAGAAGAAAGTGGCAATGGAAGCTGCAGCTATGGCAAATTATCAGAAAAGTGTTACAAAAAGCAAAATGATATTCATAATAAGAAACCACCAAATGGTTATCTTTGTGTCTATGTTGGACCTGAGAGACAAAGATTTGTAATCAAGATCAAAGTATTCAATCACCCTTTGTTCAAAACACTTTTAGAAGATGTTGAGAATGAGTATGGTTATAGAAACAATGGTCCTCTATGGTTTCCTTGTAATGTTGAGTTGTTCTGTGAGACACTTGTGGAAATAGAGAGTGTTTGA 348 0.3621 MDFVKKCKRACGSRSNRLYPEESGNGSCSYGKLSEKCYKKQNDIHNKKPPNGYLCVYVGPERQRFVIKIKVFNHPLFKTLLEDVENEYGYRNNGPLWFPCNVELFCETLVEIESV 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05306 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 109 IPR003676 GO:0009733
Trre8g05306 115 Pfam Auxin responsive protein 40 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05306 Trre-Chr8 55197318 55197665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05306 50 105 Calmodulin-binding Proteins AT3G43120 55.357 2.44e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05306 K14488 - gmx:102667331 126.331