Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05304 ATGGATTTTGTGAAGAAATGTAAGAGAGTATGGGGAAGCAACAAGAGATTACATGATTCAGAAGAAACTAGTAGTGGAAGTGGAAGCTATGGAAAATTATCAGAAAAGAGCCACAAAAAATTACAAAATAATAAGAAATTAGCACCAAATGGTTGTCTTTGTGTTTATGTTGGACCTCAGAGACAGAGATTTGTAATCAAGATCAAAATATTCAATCATCCTTTGTTCAAAACATTTTTAGAAGATGTTGAGAATGAATATGGTTATACAAATGATGGTCCTCTATGGTTTCCTTGTGATGTTGACTTGTTTTGTGAGACATTGATGGAGATGGAGTGTGATGAGAAGAATGTGGGTTGCAATTTTCAAAAGAGTCACAAGCATAACTCTGTTTATCCTTCTTCATTGTCTTGTCGTTCTAATAACATGAGTTGTAGTGATGTTAATTACCAGCTTTTGGTATAA 465 0.3355 MDFVKKCKRVWGSNKRLHDSEETSSGSGSYGKLSEKSHKKLQNNKKLAPNGCLCVYVGPQRQRFVIKIKIFNHPLFKTFLEDVENEYGYTNDGPLWFPCDVDLFCETLMEMECDEKNVGCNFQKSHKHNSVYPSSLSCRSNNMSCSDVNYQLLV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05304 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 108 IPR003676 GO:0009733
Trre8g05304 154 Pfam Auxin responsive protein 27 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05304 Trre-Chr8 55186397 55186861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05304 35 108 Calmodulin-binding Proteins AT4G34750 40.789 1.86e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05304 K14488 - gmx:102667331 135.191