Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05303 ATGGATTTTGTGAAGAAGTGCAAGAGAGTATTGGGAAGCAACAAGAGATTATATGATTCAGAAGAAAGCAGTGGAAGTGAAAGAAGCTATGGCAAAATATCTGAGAACAAATTTCAAAAAAAGCAAAAGGATATTAATAATAAGAAACCACCAAATGGTTGTCTTTGTGTCTATGTTGGATCTGAGAGACAGAGATTTGTAATCAAGATCAAAATATTCAATCATCCTTTGTTCAAAACATTTTTAGAAGATGTTGAGAATGAATATGGTTATACAAATGATGGTCCTCTATGGCTTCCTTGTGATGTTGACTTGTTTTGTGAGGCACTTGTTGAGATAGAGAGTGATGATATGGGTTTTGTGGGTTTTGGTATAGAGTTGTAA 384 0.3385 MDFVKKCKRVLGSNKRLYDSEESSGSERSYGKISENKFQKKQKDINNKKPPNGCLCVYVGSERQRFVIKIKIFNHPLFKTFLEDVENEYGYTNDGPLWLPCDVDLFCEALVEIESDDMGFVGFGIEL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05303 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 110 IPR003676 GO:0009733
Trre8g05303 127 Pfam Auxin responsive protein 7 110 IPR003676 GO:0009733
Trre8g05303 127 MobiDBLite consensus disorder prediction 19 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05303 Trre-Chr8 55178935 55179413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05303 51 106 Calmodulin-binding Proteins AT4G34750 48.214 3.79e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05303 K14488 - gmx:102667331 131.339