Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05281 ATGGCTTTCTTTGATCAATCACCTCGCAACTCTCTTGTTCCTGGATTTCTTTACTCATCAAATGCACTCTCCCATTTGGATTCTTCATCAATCAACAAAAGCATTAATCATGCAGGGTTACCACGATCATCACATTCATCATCATCGTTACCATCACGATCACATGAATGGACTAGGAAAAATATTCCTATGATCCCTTCACCAAATGAGAGTATCCCAATGTTTTCTCCCGCGTACTATGCTGCGTGCAGTGCCGGTGGTGTCTTCAGCTGTGGTCTTACTCACATGGCTGTCACTCCTCTTGATCTTGTCAAGTGCAACATGCAGATTGACCCTACAAAGTATAAGAGCATCAGTTCAGGATTTGGAGTTTTACTGAAGGAGCAGGGTGCTAGAGGTTTCTTCAAAGGCTGGGTGCCAACTTTGCTTGGTTACAGTGCTCAAGGAGCATGCAAGTTTGGATTCTATGAATTCTTTAAAAAGTATTACTCAGATCTTGCAGGACCAGAGAATGCAGTCAAGTACAAAACTTTCATATATCTAGCTGGTTCTGCTTCAGCTGAAGTTATTGCTGATGTTGCACTTTGTCCTATGGAGGCGGTAAAAGTTCGTGTTCAAACTCAGCCCGGTTATGCTCGTGGTTTGTCTGATGGGTTACCTAAGTTTATCAAGGCTGATGGTGTTTCTGGGTTGTATAAAGGACTTGTTCCTCTTTGGGGCCGTCAGATACCATACACGATGATGAAGTTTGCTTCATTTGAGACTATTGTGGAGATGATCTATAAAAATGTCATTCCAACCCCCAAAGCCCAATGCAGCAAAAGTAAGCAACTTGGAGTCAGTTTTGCAGCCGGATATATTGCAGGTGTACTGTGTGCAATCGTCTCGCACCCTGCTGATAACCTTGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGATGCAGTGAAGAAGATTGGAGTAGTTGGTCTTTTCACTCGCGGCCTTCCTCTCCGTATAGTTATGATTGGAACACTAACTGGAGCTCAGTGGGGTCTCTATGATTCATTTAAAGTATTTGTAGGCCTGCCAACTTCTGGTGGAGCTGCTCCTGCACCTGCGAAATAG 1113 0.4385 MAFFDQSPRNSLVPGFLYSSNALSHLDSSSINKSINHAGLPRSSHSSSSLPSRSHEWTRKNIPMIPSPNESIPMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPTKYKSISSGFGVLLKEQGARGFFKGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGYARGLSDGLPKFIKADGVSGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKNVIPTPKAQCSKSKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTSGGAAPAPAK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05281 370 FunFam Phosphate carrier protein, mitochondrial 78 356 - -
Trre8g05281 370 Gene3D Mitochondrial carrier domain 79 355 IPR023395 -
Trre8g05281 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 175 259 IPR018108 -
Trre8g05281 370 MobiDBLite consensus disorder prediction 37 56 - -
Trre8g05281 370 MobiDBLite consensus disorder prediction 37 62 - -
Trre8g05281 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 276 355 IPR018108 -
Trre8g05281 370 SUPERFAMILY Mitochondrial carrier 79 350 IPR023395 -
Trre8g05281 370 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 54 366 IPR044677 GO:0005315|GO:1990547
Trre8g05281 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 162 IPR018108 -
Trre8g05281 370 Pfam Mitochondrial carrier protein 177 263 IPR018108 -
Trre8g05281 370 Pfam Mitochondrial carrier protein 81 164 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05281 Trre-Chr8 54986524 54989018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05281 6 369 Chloroplast and Mitochondria Gene Families AT5G14040 75.881 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05281 K15102 - gmx:100800530 597.045