Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05211 ATGAAGGTGAAGAAGGGTTGGCTAGCGGTTCAAGTTGGTTCAGAGGAAGAATTGTCTCAAGAGGGTGGTGTAGATGATTCACAAAGATTTGTGATTCCTATTTCTTATCTTTATCATCCACTTTTCAAACGTCTTCTTGACAAAGCTTATGAGATTTATGGCTACAACACTGATGGTCCTCTTAAGTTACCTTGTTCTGTTGATGACTTTGTTCACCTCAGATGGCGAATTGAAAAAGAATCCACACCTTATCATCACCACCAACATCACAATTATCATCATCATATTCTACCTCGTGCTTTGTCTTTCAATTCTTGTTAA 321 0.3801 MKVKKGWLAVQVGSEEELSQEGGVDDSQRFVIPISYLYHPLFKRLLDKAYEIYGYNTDGPLKLPCSVDDFVHLRWRIEKESTPYHHHQHHNYHHHILPRALSFNSC 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05211 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 73 IPR003676 GO:0009733
Trre8g05211 106 Pfam Auxin responsive protein 3 76 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05211 Trre-Chr8 54407885 54408205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05211 3 105 Calmodulin-binding Proteins AT5G20810 38.095 5.08e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05211 K14488 - gmx:100306557 162.925