Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05209 ATGGCTAGGTTAAGGAGCATAGTGGAGGAAGAGAAAGGAAAATTAGCATCAACGATGATAGGAGGGTATAGGCGAAAGGCAATTGTAACGTTAGTGAAGACTTGGATGGTAGTTTCGGCGGAAACCGGTGAAGCACGCGTCGAGGATGTCGATAAATACTCCATTATGCGACGAACAGGGTTACCGGCGCGTGATCTTAGAGTACTAGATCCACATCTTTCTAATCCTTCATCAATCTTAGGAAGAGAAAGAGCAATTGTTGTTAATTTAGAACACATTAAAGCCATCATCACTTCTACCGAAGTGCTTATGATTAATTCCTCTAATCCTTTCTTTCTTCGCTTTCTTCAAGATCTTCAGGCTCGTGTTCCGCCTATTAATGATGTTAAAATGCGGACACGGATTAGTAATGATGTCGTGGATGGTGATTGTGAAGCGAAACCTTTGTTGGATGAAAGGACGCCTTTGTTTCAGAGCCGCGATGATTGTGATGATTCTTCGAATAATGCATCGGAGGGTATCCCCGATGATTCTTCAAACAATGTGTCCGCGGCTCCTAAACAGTTACCTTTTGAGTTCAAAGCGCTTGAGGCGTGTATTGAATCCGCTTGCATGAATTTCAGCCTTGAATGCGAGACTCAAAAATTGGAAGATGAGGCTTACCCGGCTTTGGATGAATTGACCTCAGAAATTTCTACTCTCAATCTTGAACGTGTAAGGCTGATCAAGAATCGTTTGGTCGCACTTTCTGGTCGTGTGCAGAAGGTAGCAGATCAACTCGAACATTTGTTGGATGATGATAATGACATGGCTGAAATGTACTTGACACAAAAGCTCGATGATGGCTTATTGGATCAAACATCATTAAAAGAAAGATACAATTCAACATTTGACGAAAATATAAACGAAAGCGATGAATCAGATTCGGTTAGCGACAAATCCTATGATTCTAAGCCTGATGTTGAGGAATTAGAGATGCTTTTAGAAGCATATTTTGCACAAATAAATGGCATCTTGCAAAAATTGTTAAGTATGAGTGAGTACGTGGATGATACAGAAGACTACATCAACATAATGTTAGATGATAAGAGAAATGAGCTTCTACAAGTATCAATTACATTCAGCACAATAAATATGATAATCAGTGCAGGTATTGTGGTTGTTGGATTGTTTGGCATGAATATTCACATTGCACTCTTTGATGGAGACCCTCATTATCAATTTTGGACCCTAGTTGGTTGCACAATTGGAGGCTGCATATTGTTAACACTTGTTTCTATTTGGTGGGGTAGAAAAAGATATTTGCTCTCTGAATAG 1317 0.3986 MARLRSIVEEEKGKLASTMIGGYRRKAIVTLVKTWMVVSAETGEARVEDVDKYSIMRRTGLPARDLRVLDPHLSNPSSILGRERAIVVNLEHIKAIITSTEVLMINSSNPFFLRFLQDLQARVPPINDVKMRTRISNDVVDGDCEAKPLLDERTPLFQSRDDCDDSSNNASEGIPDDSSNNVSAAPKQLPFEFKALEACIESACMNFSLECETQKLEDEAYPALDELTSEISTLNLERVRLIKNRLVALSGRVQKVADQLEHLLDDDNDMAEMYLTQKLDDGLLDQTSLKERYNSTFDENINESDESDSVSDKSYDSKPDVEELEMLLEAYFAQINGILQKLLSMSEYVDDTEDYINIMLDDKRNELLQVSITFSTINMIISAGIVVVGLFGMNIHIALFDGDPHYQFWTLVGCTIGGCILLTLVSIWWGRKRYLLSE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05209 438 FunFam Magnesium transporter MRS2-1 22 107 - -
Trre8g05209 438 Gene3D Magnesium transport protein CorA, transmembrane region 115 367 - -
Trre8g05209 438 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 24 433 IPR039204 -
Trre8g05209 438 MobiDBLite consensus disorder prediction 155 182 - -
Trre8g05209 438 FunFam Magnesium transporter MRS2-E 115 367 - -
Trre8g05209 438 Coils Coil 224 244 - -
Trre8g05209 438 Gene3D - 26 108 - -
Trre8g05209 438 MobiDBLite consensus disorder prediction 295 316 - -
Trre8g05209 438 CDD Mrs2_Mfm1p-like 35 433 IPR039204 -
Trre8g05209 438 MobiDBLite consensus disorder prediction 161 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05209 Trre-Chr8 54365929 54372411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05209 34 436 MRS2 Gene Family AT3G19640 45.759 5.83e-118 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05209 - K16075 gmx:100808805 489.96