Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05200 ATGTCTTTGCTTTCAAGCAGTGCCACTGATGACATTAACTTTGATGGTATTGAAAACTTTCAAAGCTTTTATGAGTGTTGGATAGTTGAGCAAAACCAATATCTGAATGAACTTGTAGCTGCTAAATCAGCTCAACCTCAGCTCACAAATGACAGAATGCATGCACTGATTGATAAGGTGATTGAGCATTATGAGCATTACTATAAGGCAAAGTCAATTTGTGCAAAGAAGGATGTTTTGTCGATATTTTCACCACCATGGTTAAGCACTTTAGAAGAGGCTTTTCTTTGGATTGGTGGATGGAGACCAAGCATGGCATTTCATTTGTTATATTCAAAATGCAGTATGCAATTTCAAGCAAGGTTGAATGACCTTATTCAAGGACAAAAAACATGTGACCTCGGAGATCTCTCGGCGGCCCAACTCGCAGAGTTCGATGATTTGCAAAAGAGGACTATTAGGGAAGAGAGAGAGATCACTGATATGATGGCTGAGCATCAGGAGACGGTGGCCGATGCTCCAATGGTGGAGTTGTCTCATGTGATTTCTGAGATGATTAGAGGAGGAGAGAATGAGAAGAAAGAATTGGAAGAGAGGATTGAATCAGTTCTTGAACCTAAGGTGGAAGGTTTGGAGAAGATTCTTCATAGAGCTGATGATTTAAGGCTGAGAGCATTGCAGGGCATTGTTAATATTCTGACTCCAAAACAAGCTATTTACTTCTTGATTGCTGCTGCAGAACTTCACCTGAGGCTGCATGAGTGGGGTAAAAAGAAGGATGATGCCAAAAGAGGCCAACAAGGTATTAGGGAAGGTGAAAGCCATAATTCCTGA 834 0.4101 MSLLSSSATDDINFDGIENFQSFYECWIVEQNQYLNELVAAKSAQPQLTNDRMHALIDKVIEHYEHYYKAKSICAKKDVLSIFSPPWLSTLEEAFLWIGGWRPSMAFHLLYSKCSMQFQARLNDLIQGQKTCDLGDLSAAQLAEFDDLQKRTIREEREITDMMAEHQETVADAPMVELSHVISEMIRGGENEKKELEERIESVLEPKVEGLEKILHRADDLRLRALQGIVNILTPKQAIYFLIAAAELHLRLHEWGKKKDDAKRGQQGIREGESHNS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05200 277 ProSiteProfiles DOG1 domain profile. 17 262 IPR025422 GO:0006351|GO:0043565
Trre8g05200 277 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 18 271 - -
Trre8g05200 277 Pfam Seed dormancy control 35 112 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05200 Trre-Chr8 54290117 54290950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05200 15 252 bZIP Transcription Factor Family AT5G06950 25.820 1.54e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05200 - - cam:101504084 429.098