Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05197 ATGAAAAGCCTCTGTCTTCAACCGTTGCTTGCTCCTAGCAGTGCCTTAGTTGGTAGCAGACTCTTTGCAAACCATTTAACCACAAAGTGCTTTCCCAAGCAACTTCATTTCCACTCTCGCTGTGTTGTTGTCTCTTCATACTCGTCGAGTTCTGCAACTCTATCTGCCGAATCAGAAGTAGAAAAGAAACAAGTGTTTGATGGAGACAAGGCTGCTTTGCTTGTTAGAGAGCTCAGGAATAATTTTGACAGCGGCAAGACAAAGAGCTATGAATGGCGGATTTCACAATTAGAGGCCATAGCTAAGATGTTAGTAGAGAAAGAGAATGAAATTATTGATGCTCTTCAAAAGGACGTTTCTAAACCGAGACTAGAAGCATATATAACTGAGGTTTTTCAGGTGAAAACTTCATGTAATGAAGCACTTCAAGAACTGAAACATTGGATGAAGCCTGAAAAGGTGAGTACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTATCAGAACCACTAGGAGTTGTATTGATCATATCAACATGGAACTTTCCTCTGTCATTATCATTGGATCCAGTCATTGGAGCCATTTCAGCGGGTAACACTGTGGTTTTGAAACCGTCAGAAATTTCTCCTGCAACATCATCTCTGCTAGCAAATTTACTAGAAATTTATCTAGACAACTCTGCAGTAAGAGTTGTTGAAGGCGCTGTTCCTGAAACAACTGCACTCCTGGACCAGAAGTGGGATAAGATACTTTACACAGGTAGTGCTCGAGTAGGTCGCATTGTTTTGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTCTGGAGCTTGGAGGAAAGTGTCCAGCAGTTGTTGATTCAAATATCAACTTACAAGTCACTGCTAGAAGGATAATTGCTGGCAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATTACAAGAAAAGACTTCGCTCCAACGCTTATAGCTGCTTTAAAAGAAGAGCTGGAGAATTTTTTTGGGAAAGATCCGATAGAATCGAAAGATATGTCTCGTATTGTGTCTCCAACTCAATTTGCACGACTCATAAAACTCTTGGATGAGGATAAGGCATCTGACAAAATTGTTCTAGGCGGTCAGAGGGATGAGAAGAAATTAAAGATTGCTCCAACTATCTTATTGGATGTTCCAGAAGATGCTATGGTTATGCAAGAGGAGATATTTGGGCCAATATTGCCAATTATCACTGTAGACAACATAGAAGATTGCTATGGTATAATAAAATCAAGGCCGAAACCTCTCGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCTTCTGGAGGGATGCTCATCAACGACGCTGTCGTGCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGCGGAATGGGTTGTTACCATGGAAAGTTCTCTTTTGATAGTTTCAGCCATAAGAAGGCAGTTTTGTATAAAGGTTTTGAGTCAGATCCATCCATAAGGTATCCACCATATACACCTGAGAAGGAAAAAATATTGAGGGCCATTTTAGACGGCAATATCTTTGCGATAATTCTTGCTTTGCTTGGATGGTCTAAGTAA 1635 0.4067 MKSLCLQPLLAPSSALVGSRLFANHLTTKCFPKQLHFHSRCVVVSSYSSSSATLSAESEVEKKQVFDGDKAALLVRELRNNFDSGKTKSYEWRISQLEAIAKMLVEKENEIIDALQKDVSKPRLEAYITEVFQVKTSCNEALQELKHWMKPEKVSTSITTFPSSAEIVSEPLGVVLIISTWNFPLSLSLDPVIGAISAGNTVVLKPSEISPATSSLLANLLEIYLDNSAVRVVEGAVPETTALLDQKWDKILYTGSARVGRIVLAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIIAGKWACNSGQACISVDYIITRKDFAPTLIAALKEELENFFGKDPIESKDMSRIVSPTQFARLIKLLDEDKASDKIVLGGQRDEKKLKIAPTILLDVPEDAMVMQEEIFGPILPIITVDNIEDCYGIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVATRGLPFGGVEESGMGCYHGKFSFDSFSHKKAVLYKGFESDPSIRYPPYTPEKEKILRAILDGNIFAIILALLGWSK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05197 544 Coils Coil 97 117 - -
Trre8g05197 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 280 480 IPR016163 GO:0016620
Trre8g05197 544 Pfam Aldehyde dehydrogenase family 72 500 IPR015590 GO:0016491
Trre8g05197 544 PANTHER ALDEHYDE DEHYDROGENASE 70 535 IPR012394 GO:0006081
Trre8g05197 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 79 498 IPR016162 GO:0016491
Trre8g05197 544 FunFam Aldehyde dehydrogenase 280 480 - -
Trre8g05197 544 PIRSF ALDH 51 539 IPR012394 GO:0006081
Trre8g05197 544 FunFam Aldehyde dehydrogenase 79 283 - -
Trre8g05197 544 SUPERFAMILY ALDH-like 74 515 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05197 Trre-Chr8 54275034 54278455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05197 4 544 Aldehyde Dehydrogenase Gene Family AT4G34240 61.738 0.0 676