Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05196 ATGAAAAGCCTCTGTCTTCAACCGTTGCTTGCTCCTAGTGCCTTAGTTGGTAGCAGACTCTTTGCAAACCATTTAACCACAAAGTGCTTTCCCAAGCAACTTCATTTCCACTCTCGCTGTGTTGTTGTCTCTTCATACTCGTCGAGTTCTGCAACTCTATCTGCCGAATCAGAAGTAGAAAAGAAACAAGTGTTTGATGGAGACAAGGCTGCTTTGCTTGTTAGAGAGCTCAGGAATAATTTTGACAGCGGCAAGACAAAGAGCTATGAATGGCGGATTTCACAATTAGAGGCCATAGCTAAGATGTTAGTAGAGAAAGAGAATGAAATTATTGATGCTCTTCAAAAGGACGTTTCTAAACCGAGACTAGAAGCATATATAACTGAGGTTTTTCAGGTGAAAACTTCATGTAATGAAGCACTTCAAGAACTGAAACATTGGATGAAGCCTGAAAAGGTGAGTACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTATCAGAACCACTAGGAGTTGTATTGATCATATCAACATGGAACTTTCCTCTGTCATTATCATTGGATCCAGTCATTGGAGCCATTTCAGCGGGTAACACTGTGGTTTTGAAACCGTCAGAAATTTCTCCTGCAACATCATCTCTGCTAGCAAATTTACTAGAAATTTATCTAGACAACTCTGCAGTAAGAGTTGTTGAAGGCGCTGTTCCTGAAACAACTGCACTCCTGGACCAGAAGTGGGATAAGATACTTTACACAGGTAGTGCTCGAGTAGGTCGCATTGTTTTGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTCTGGAGCTTGGAGGAAAGTGTCCAGCAGTTGTTGATTCAAATATCAACTTACAAGTCACTGCTAGAAGGATAATTGCTGGCAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATTACAAGAAAAGACTTCGCTCCAACGCTTATAGCTGCTTTAAAAGAAGAGCTGGAGAATTTTTTTGGGAAAGATCCGATAGAATCGAAAGATATGTCTCGTATTGTGTCTCCAACTCAATTTGCACGACTCATAAAACTCTTGGATGAGGATAAGGCATCTGACAAAATTGTTCTAGGCGGTCAGAGGGATGAGAAGAAATTAAAGATTGCTCCAACTATCTTATTGGATGTTCCAGAAGATGCTATGGTTATGCAAGAGGAGATATTTGGGCCAATATTGCCAATTATCACTGTAGACAACATAGAAGATTGCTATGGTATAATAAAATCAAGGCCGAAACCTCTCGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCTTCTGGAGGGATGCTCATCAACGACGCTGTCGTGCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGCGGAATGGGTTGTTACCATGGAAAGTTCTCTTTTGATAGTTTCAGCCATAAGAAGGCAGTTTTGTATAAAGGTTTTGAGTCAGATCCATCCATAAGGTATCCACCATATACACCTGAGAAGGAAAAAATATTGAGGGCCATTTTAGACGGCAATATCTTTGCGATAATTCTTGCTTTGCTTGGATGGTCTAAGTAA 1632 0.4062 MKSLCLQPLLAPSALVGSRLFANHLTTKCFPKQLHFHSRCVVVSSYSSSSATLSAESEVEKKQVFDGDKAALLVRELRNNFDSGKTKSYEWRISQLEAIAKMLVEKENEIIDALQKDVSKPRLEAYITEVFQVKTSCNEALQELKHWMKPEKVSTSITTFPSSAEIVSEPLGVVLIISTWNFPLSLSLDPVIGAISAGNTVVLKPSEISPATSSLLANLLEIYLDNSAVRVVEGAVPETTALLDQKWDKILYTGSARVGRIVLAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIIAGKWACNSGQACISVDYIITRKDFAPTLIAALKEELENFFGKDPIESKDMSRIVSPTQFARLIKLLDEDKASDKIVLGGQRDEKKLKIAPTILLDVPEDAMVMQEEIFGPILPIITVDNIEDCYGIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVATRGLPFGGVEESGMGCYHGKFSFDSFSHKKAVLYKGFESDPSIRYPPYTPEKEKILRAILDGNIFAIILALLGWSK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05196 543 Pfam Aldehyde dehydrogenase family 71 499 IPR015590 GO:0016491
Trre8g05196 543 PIRSF ALDH 50 538 IPR012394 GO:0006081
Trre8g05196 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 279 479 IPR016163 GO:0016620
Trre8g05196 543 FunFam Aldehyde dehydrogenase 279 479 - -
Trre8g05196 543 Coils Coil 96 116 - -
Trre8g05196 543 FunFam Aldehyde dehydrogenase 78 282 - -
Trre8g05196 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 497 IPR016162 GO:0016491
Trre8g05196 543 SUPERFAMILY ALDH-like 73 514 IPR016161 GO:0016491
Trre8g05196 543 PANTHER ALDEHYDE DEHYDROGENASE 69 534 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05196 Trre-Chr8 54275034 54278455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05196 16 543 Aldehyde Dehydrogenase Gene Family AT4G34240 62.689 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05196 K00128 - gmx:100800699 888.641