Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05189 ATGTCGGAGGTGATGTGGTGTTTGTGCCTCTGCTCGGTGGTTTTTTCTGTTTTCGGTGGTTCTTTCTCACGCTGGAAACCTGTGAAAGCCTTCCTCTTCTGTTTTTCTGCTGCTGCAACATATGTTTTACCCAGGGATGTATCTTGCTACCAGATAATTGTAGAATCAAAGGATTGCTTTAATTTGACGAAAGAGAATTACAACGAAAAAGAAGATTATTCCAATTCAAAGCTCGTTCACAAGTCAAGGTCATTTGAGAGGCACTGGACATTTCTAAGTTCAGCAGCTATGATGAGCTACACAATGAGCTGGATTAACTATTTGGGACCTGATATAAAGAGAGGACATTTCACAAATGAAGAAGAGGAAAATATCATTAAACTCCATGAAATGCTTGGGAACAGCAGCTGA 411 0.4015 MSEVMWCLCLCSVVFSVFGGSFSRWKPVKAFLFCFSAAATYVLPRDVSCYQIIVESKDCFNLTKENYNEKEDYSNSKLVHKSRSFERHWTFLSSAAMMSYTMSWINYLGPDIKRGHFTNEEEENIIKLHEMLGNSS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05189 136 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 99 134 - -
Trre8g05189 136 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 136 IPR017930 -
Trre8g05189 136 SUPERFAMILY Homeodomain-like 103 135 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05189 Trre-Chr8 54229453 54231751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05189 89 134 MYB Transcription Factor Family AT4G38620 54.902 4.40e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05189 K09422 - zof:121981125 63.929