Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05150 ATGGTAATGACAATGAGGACCCATCTGCCCAGAAGAAGCCCCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGCTGGGCATTGACAATATTTATTGATGAAATAGATGCAATTGCCCCTCCAAGGAAAGATGGGGTTGAAGAGCTATCTAAAAGATTGGTTGGAACCTTGTTGGAACTGATGGATGGAATTGGTATAAATGGAGGATTAGTTGTAATTGCTGCTACAAATAGGCCTGACCATATTGATCCAACTCTCAGACAGGGTGGAAGATTTGACAAGGATATTGAAATTGGTCGACGAAGTGCTTCTCTCGGTGACTCTATGGATCTGGCGATATTAGGATATTGA 372 0.4355 MVMTMRTHLPRRSPGLFGLWSCTASLLLLLISWALTIFIDEIDAIAPPRKDGVEELSKRLVGTLLELMDGIGINGGLVVIAATNRPDHIDPTLRQGGRFDKDIEIGRRSASLGDSMDLAILGY 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05150 123 Pfam ATPase family associated with various cellular activities (AAA) 37 107 IPR003959 GO:0005524|GO:0016887
Trre8g05150 123 PANTHER AAA-FAMILY ATPASE 37 106 - -
Trre8g05150 123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 107 IPR027417 -
Trre8g05150 123 Gene3D - 23 117 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05150 Trre-Chr8 53963871 53964910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05150 37 111 Calmodulin-binding Proteins AT3G56690 64.000 3.64e-27 102