Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g05094 ATGAAAAGAAACAATATTCCATATGTGATTGTAATAATCATACAAGCCATATATGCTGCTATGTTTATTCTTTCAAAAGCTGCATTCGATCATGGCATGAACAATTTTGTCTTTGTCTTCTATAGACAATCTGCAGCAACTATTTTTCTAATACCTTTTGCTCTCTTCTTTGAATGGAAAAGTGCACCTCCTCTGCCATTTACAACTTTTTGCAAAATCTTCTTCATTTCTTTCATTGGGATAACATCAAGCTTGGACATATATGGTATTGCTCTAATAAAAACTTCTGCAACTTTGGCTTCTGCTACTACTAATTGTCTTCCAGTTATTACCTTCTTCTTGGCACTCCTATTCAGGATCGAAGTTTTGAAAGTAAAGACAGCTGCTGGGGCAGCTAAGTTGGCTGGTGTTGTGGCATGTTTGGGTGGAGCAGCAACCCTTGCTTTTTATAAAGGTCCTCATTTACAACTTTTAAGCCATTTTCACTTTTTGGGTAATTACCATAAAACCCAACAACAACAACATCAAGGCCACGATTGGATCAAGGGTTGCTTCCTCATGCTTCTTTCCAACACCTTTTGGGGAATGTGGCTTGTACTACAAACTTTTATCGTAAAAGGGTACCCTTCAAAGCTGCTACTCACAACTCTTCAATGTTTCTTAAGTTCAATTCAGTCTTTGGTCGTAGCGTTGGCCGTAGAAAGAGATCTTGAGCAATGGAAATTGGGTTGGAATGTCAGGCTCCTCGCCGTGTTATACTGTGGAATTATGGTGACTGGTGTGACCTATTATTTACAAACATGGGTTATAGAGAAGAGAGGACCAGTGTTTCTAGCCATGTCAACACCATTAGCTTTGATCATGACTATGTTCTCCTCAGTAATTCTCTTGGGAGAGATTATAAGTTTAGGAAGCCTTTTAGGTAGCTGCGCTTTGGTTTTAGGATTGTACTTTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCGATAGCTTCCGTAGACTTGGAGAAAGCTTCATGTTTGAGCGAAACTAACAAGTGA 1041 0.3948 MKRNNIPYVIVIIIQAIYAAMFILSKAAFDHGMNNFVFVFYRQSAATIFLIPFALFFEWKSAPPLPFTTFCKIFFISFIGITSSLDIYGIALIKTSATLASATTNCLPVITFFLALLFRIEVLKVKTAAGAAKLAGVVACLGGAATLAFYKGPHLQLLSHFHFLGNYHKTQQQQHQGHDWIKGCFLMLLSNTFWGMWLVLQTFIVKGYPSKLLLTTLQCFLSSIQSLVVALAVERDLEQWKLGWNVRLLAVLYCGIMVTGVTYYLQTWVIEKRGPVFLAMSTPLALIMTMFSSVILLGEIISLGSLLGSCALVLGLYFVLWGKSREQMPIASVDLEKASCLSETNK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g05094 346 PANTHER WAT1-RELATED PROTEIN 7 327 IPR030184 GO:0016020|GO:0022857
Trre8g05094 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Trre8g05094 346 Pfam EamA-like transporter family 7 132 IPR000620 GO:0016020
Trre8g05094 346 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Trre8g05094 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g05094 Trre-Chr8 53516922 53520812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g05094 7 254 Nodulin-like Gene Family AT5G64700 59.766 1.69e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g05094 - - gmx:100796986 488.034