Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre8g04991 | ATGCATTTTCATTCATCCAAGGAGGAAGCTTTGAAGAGTCTAAAGCTGGCTACCACACTATCTTGGAGGCATTCTGCCAACAATGGCAGCAGCCATGCTTCCACTGATCTGGAAAGGAATGGTGATGGGAAGGCTCAAGATTCAGAGCCCCCAACTCCACATTCTGTTATGAAGATGGGATTGAGAGATCGTAGTAGCAGCATGGAGGATCCAGATGGGACTTTAGCTAGTGTTGCTCAATGCATTGAGCAGCTGCGCCAGAGCTCGTCTTCTGTGCACGAGAAAGAGTATTCCTTAAGGCAGTTAATGGATCTTATAGATATGCGTGAAAATGCATTTAGTGCTGTTGGATCTCACTCTCAAGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGTTCGTTGAATGTGAAGATCCAGGCAGCAACTGTTTTGGGCTCACTTTGCAAAGAAAATGAACTGAGGGTAAAAGTTTTGCTTGGTGGATGTATTCCTCCATTGCTTGGTCTCCTAAAGTCAAGTTCTACTGAAGGTCAAATTGCTGCTGCAAAGACTATATATGCTGTCTCACAAGGTGGGGTGAAAGATCATGTTGGTTCCAAAATATTTTCAACCGAAGGAGTAGTACCAGTGCTTTGGGAGCAGTTGCGAACTGGTCTGAAAGCCGGAAATGTCGTTGAAAGTTTACTGACGGGAACATTGAAAAATCTCTCTAGCAATGCTGAGGGATTCTGGAATGCAACAATTCAAGCGGGAGGAGTAGACATATTAGTGAAGTTATTGGCAACAGGGCAGCCTAGCACTTTAGCCAATGTTTGCTTTTTGCTTGCTGCTGTAATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGAATGCAGAGGTGACTAAACAACTCTTGAAACTATTAGGCCCTGGTAACGATGACCTCGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTATCTGCTCAATGCAAAGAGGCAAGGCGGGAAATAGCCAGTTCTAATGGCATTCCTGCTTTGATCAATGCTACTATAGCTCCTTCTAAAGAGTACATGCAGGGTGAGTGTGCTCAAGCATTACAAGAGAATGCTATGTGTGCTTTAGCAAACATCTCTGGTGGTTTGTCTTATGTCATATCTAGCCTTGGTCAAAGCCTTGAATCATGCTCTTCCTCTACCCAAATTGCCGACACTTTAGGAGCTATAGCATCAGCTCTTATGATATATGATAACAAGGCAGAATCTACCAAACCATCAGATCCTTTGGTGGTTGAACAGACATTACTGAAACAATTCAAACCTCGCTTGCCCTTCCTTGTGCAAGAACGGACCATTGAAGCTCTAGCTAGTTTGTACGGCAATCCCATACTCTCGGCTAAACTAGCAAATTCTGATGCAAAACATTTGCTCGTTGGTCTGATAACAATGGCTTCCAATGAAGTGCAAGAGGAGCTTATAAAAGCTCTGTTGACACTGTGCAAAAGTGAAGGCAGCCTATGGCGTGCACTTCAGGGACGTGAAGGAATTCAGCTATTGATATCTCTTCTTGGTCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCTTTGCTTTGCCTTTTATCTAATGAAAATGATGAAAGTAAATGGGCAATTACCGCTGCTGGTGGTATACCTCCACTTGTTCAAATTTTGGAAACAGGATCTGCAAAAGCAAAGGAAGATTCGGCAAGAATCCTTAAGAACTTGTGCAATCATAGTGAAGATATACGTGCTTGCGTTGAAAGTGCAAATGCTGTTCCTGCGTTGTTGTGGCTATTGAAGAATGGAAGTCCTAATGGGAAGGATATTGCAGCAAAGACCATAAATCATTTAATTCATAAATCTGATACTACGACCATCAGTCAACTTACAGCATTATTAACAAGTGAACTTCCTGATTCTAAGATATATGTTTTGGATGCTTTGAGAAGTATGCTCTGTGTTGCTCCACTTAGCGACATTTTACGCGAAGGTAGTGCTGCTGGTGATGCATTTGATACTATGATAATGTTATTGAGCTCTACCAAGGAAGAAACTCAGGCAAAATCTGCGTCAGCTCTGGCCGAAATTTTTGAAGCAAGGAAAGATTTGCGTGAAAGTAGCGTTGCTGTCAAAGCTCTTTGTTCAGCCATGAAATTGCTTAATGTTGAATCTGAAAGTATCCTAATGGAGTCCTCAAACTGCCTGGCTTCAATTTTTCTTTCCATCAAAGAGAACAAGGATGTAGCAGCTGTTGCTAGAGATGCATTATCCTCGCTGGTTGCACTAGCTAACTCTTCGATTTTGGAAGTGGCAGAAATGGCTATAGGTGCTGTAGCAAATCTTATTTTGGATATTGAAATGGCAAAAAAAGTTGTTGCAGAAGAAGTTATCTTACCTGCTACTAGAGTATTGAATGAAGGCACAATTTCTGGAAAAACTCATGCTGCAGCAGCAATTGCTCGCCTTTTATATTCTCATAAAGTTGATAATGCTGTTACTGATTGTGTGGATCGTGCCGGAACTGTTCTTGCATTAGTTTCTTTTTTGGATTCTTCTGTCAATGGATCTATTGACACATCAGAGGCTTTAGAAGCACTTGTCATTCTGTCCAGGTCAGAAGAGAGCGGCGCAAATATTAAATCAGCATGTGCAGTTTTGGCTGAATTCCCTGAAAGCTTAATCCCAATAGTCCTGTGCATTGCTAATTCAACACCGACATTGCAAGATAAAACAATCGAGATTTTATCTCGATTATGTAAAGATCAGCCTACTGTTTTAGGAGATAGTGTTATTTCTGCCTCTGGATGTATATCTTCAATAGCTAAAAGGATAATTAGTTCCACTAATGTGAAGGTCAAAATTGGTGGTGTTGCGCTCCTTATTTGTGCTGCAAAAACAAATCATCAGAGACTGGTGGAGGATCTCAATATATCAAACTTGTCTGTTAACCTTATTAAGTCTCTAGTTGATATTCTTATTTCTGCACAGTCTTCTTTGGGTAATAGCGGGGATGATGATGACAAGGAATCCATCAGCATATGCAGGCATGAAAAAGAAGAGGCCAACGGCCGTGAATCCAAAACTGGAACTTCCATTATATGCGGTGTTGACTTAGCTATATGGTTACTATCTATTCTTGCTTGCCATGATGGAAAAAATAAAAATGCAATAATGAAGGCTGGAGCAATTGATGCCGTCACCGACAGGATCTCAAATTGTTACTCACAATATTCTCAGGTTGACTACAAAGAAGATAACAGCACGTGGATTTGTGCCTTGTTGTTGGCAATCTTATATCAAGATAGAGATATCATACGGGCACATGCAACCACAAAGTCTGTACCAGCACTTGCCAATTTATTGAAGTCAGACGAAACCGAGAACAAATATTTTGCTGCACAATCAATAGCCAGCCTTGTTTGTAATGGTAATAGGGGAACACTTCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACCGATATACAAGATCTTCTTGAAATGTCCGAGGAATTTTCTTTAGTGCGTTATCCTGATCAAGTGGCTCTAGAGAGGTTGTTTAGAGTTGATGATATAAGAGTTGGCGCCACTTCTCGGAAGGCAATACCAGCCCTAGTTGATCTTCTCAAACCAATTCCGGATCGCCCAGGTGCACCATTTTTAGCTCTCGGGCTTTTAACTCAACTTGGTAGAGATTGTCCGTCAAATAAGACTATAATGGTAGAATCCGGGGCTTTAGAGGCTCTTACGAAGTATCTTTCCCTTGGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGGAATTCTGTTTAGTAGTGCTGATATACGAAAACACGACTCTGCATTTGGCGCTGTTAATCAACTTGTAGCTGTCCTACGTTTAGGAGGAAGGGGTGCAAGGTATAGCGCTGCAAAAGCTTTGGAAAGTTTATTCTCTGCAGACCATATTAGAAACGCTGAGATTGCTCGCCAAGCTGTTCAACCCTTGGTAGAAATTCTTAGTACCGGTTCAGAAAGGGAGCAGCATGCTGCAATTGCTGCATTGGTTGGGTTACTGAGTGAAAATACATCAAGAGCACTCGCTGTTGCAGATGTTGAGATGAATGCAGTGGATGTTCTTTATAAGATCCTTTCGTCAAATTGTTCAACGGACCTCAAAGGGGATGCTGCTGAATTATGTTGTGCTCTTTTTGGAAATACAAGGATTCGGTCCACGATGGCTGCTGCACGATGCATTGAACCACTAGTCTCTCTCCTTGCAACCGAGTTTAGTTCTGCTCATCATTCAGTTGTTCGGGCATTGGATAGGCTTGTTGACGACGAGCAACTGGCTGAATTAGTTGCTGCAAATGGTGCAGTTATTCCTCTTGTTAGTCTACTGTCTAGTAGAAACTATGTACTTCACGAGGCCATTTCCAGAGCTTTGGTCAAGTTAGGAAAAGACAGACCTGCTTGTAAAATGGAAATGGTAAAAGCTGGAGCCATTGAAAGAATACTAGACATCTTACATGAAGCACCTGATTTTTTGTGCGCAGCTTTTGCAGAACTGTTGCGTATATTAACCAATAATGCTACCATAGCTAAAGGACCATCGGCCGCTAAAGTTGTTGAACCCTTGTTTTTGTTGTTGACAAGATATGATTTTGGGCCCGACGGACAGCACGGTGCAATGCAGGTTTTGGTTAATATCTTGGAACATCCAAAGTGTCGTGCTGACTATTCATTGACTTCTCACAAAGTTATTGAACCACTTATCCCTTTGCTTGATTCACCGATATCAGTAGTGCAACAGTTGGCTGCTGAGCTTCTTTCACATCTGCTCCTAGAAGAACATCTTCAAAAGGATCCAGTGACACCGAAAGTAATTGCCCCTCTTATAAGAATTCTCGGTTCTGGTATACCTTTATTGCAGCAGCGAGCTCTAAAGGCCCTAGTTAGTATTGCGCTAACATGGCCGAACGAAATTGCCAAAGAGGGTGGTGTTGTTGAGATTTCCAAAGTGATATTGCAAGCTGATCCATCCCTTCCTCATGCTTTATGGGAATCTGCTGCATCTGTCCTGTCAAGTATTCTGCAATTTAGCTCAGAATTCTACTTGGAAGTTCCTGTTGCTGTGTTGGTAAGGTTGCTTCGGTCAGGCTCAGAGAGCACAGTTATCGGTGCGTTAAATGCTCTTCTAGTTTTGGAAAGTGATGATGGAACTAGTGCAGAATCTATGGCTGATAGTGGTGCAATAGAGGCTCTCTTGGAGCTCCTAAGATCTCATCAGTGTGAGGAAGTCGCTGCACGACTCTTAGAAGTATTGCTGAACAACGTAAAGATCAGAGAAACAAAAGTTACTAAGTCAGCCATCTTACCGTTATCACAATATCTATTGGACCCACAAACCCAAGCACAGCATGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTTTTCCAGAATGAGGCTCTTGCTCGAACAGGTGATGCAGTTTCTGCGTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCGACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAAAATCTTGTGATGTACAGTCGACCAAATAGAAGAGCAGTTGCAGAGGCCGGTGGTGTTCAGGTTGTACTGGATCTGATAGGTTCAAGTAATCCTGAAACTTCTGTCCAGGCTGCGATGTTTATTAAACTTCTGTTCTCAAATAATACAATTCAAGAGTACGCTTCTAGCGAAACAGTCAGAGCAATTACTGCCACTATTGAAAAAGATTTATGGGCGAGTGGAACTGTGAACGAGGAATATCTGAAAGCATTAAATTCTCTATTAAGCAACTTCCCACGACTGAGAGCAACCGAACCTGCGACACTTAGTATTCCCCATCTGGTAACATCCTTAAAGACAGGTTCAGAGGCTTGTCAGGAAGCTGCCTTAGATGCACTTTTTCTGCTCAGACAAGCTTGGTCAGCATGCCCTGCTGAAGTTTCAAGAGCTCAGTCAATTGCAGCTGCAGATGCTATTCCTTTCCTGCAGTACTTAATCCAGTCTGGTCCGCCTCGGTTTCAGGAGAAGGCGGAATTTTTATTGCAGTGTTTGCCAGGGACATTGGTGGTGATCGTAAAGCGTGGTAACAATATGAGACAGTCTGTTGGAAACCCTAGTGTGTACTGCAAGATTACTCTTGGCAATAATCCGCCGAGGCTAACAAAGGTGGTCTCAACTGGTCCCAATCCGGAGTGGGAAGAGAGCTTTACATGGTCCTTTGAGAGTCCACCAAAAGGCCAAAAACTACATATTTCTTGCAAAAACAAAAGCAAAGTGGGAAAGAGTAAATTTGGGAAAGTAACAATCCAAATTGATCGAGTGGTAATGCTCGGAGCCGTAGCTGGTGAGTACACTCTGTTGCCGGCAAGTAAAAGTGGACCACCAAGGAATCTAGAAATTGAATTTCAGTGGTCTAACAAAGCAAATGATACAACAACTGATACAGTTCAACAGTAG | 6537 | 0.4257 | MHFHSSKEEALKSLKLATTLSWRHSANNGSSHASTDLERNGDGKAQDSEPPTPHSVMKMGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSVHEKEYSLRQLMDLIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLRTGLKAGNVVESLLTGTLKNLSSNAEGFWNATIQAGGVDILVKLLATGQPSTLANVCFLLAAVMMEDASVCSKVLNAEVTKQLLKLLGPGNDDLVRAEAAGALKSLSAQCKEARREIASSNGIPALINATIAPSKEYMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCSSSTQIADTLGAIASALMIYDNKAESTKPSDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNPILSAKLANSDAKHLLVGLITMASNEVQEELIKALLTLCKSEGSLWRALQGREGIQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSARILKNLCNHSEDIRACVESANAVPALLWLLKNGSPNGKDIAAKTINHLIHKSDTTTISQLTALLTSELPDSKIYVLDALRSMLCVAPLSDILREGSAAGDAFDTMIMLLSSTKEETQAKSASALAEIFEARKDLRESSVAVKALCSAMKLLNVESESILMESSNCLASIFLSIKENKDVAAVARDALSSLVALANSSILEVAEMAIGAVANLILDIEMAKKVVAEEVILPATRVLNEGTISGKTHAAAAIARLLYSHKVDNAVTDCVDRAGTVLALVSFLDSSVNGSIDTSEALEALVILSRSEESGANIKSACAVLAEFPESLIPIVLCIANSTPTLQDKTIEILSRLCKDQPTVLGDSVISASGCISSIAKRIISSTNVKVKIGGVALLICAAKTNHQRLVEDLNISNLSVNLIKSLVDILISAQSSLGNSGDDDDKESISICRHEKEEANGRESKTGTSIICGVDLAIWLLSILACHDGKNKNAIMKAGAIDAVTDRISNCYSQYSQVDYKEDNSTWICALLLAILYQDRDIIRAHATTKSVPALANLLKSDETENKYFAAQSIASLVCNGNRGTLLSVANSGAAGGLISLLGCADTDIQDLLEMSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGRDCPSNKTIMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSADIRKHDSAFGAVNQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEIARQAVQPLVEILSTGSEREQHAAIAALVGLLSENTSRALAVADVEMNAVDVLYKILSSNCSTDLKGDAAELCCALFGNTRIRSTMAAARCIEPLVSLLATEFSSAHHSVVRALDRLVDDEQLAELVAANGAVIPLVSLLSSRNYVLHEAISRALVKLGKDRPACKMEMVKAGAIERILDILHEAPDFLCAAFAELLRILTNNATIAKGPSAAKVVEPLFLLLTRYDFGPDGQHGAMQVLVNILEHPKCRADYSLTSHKVIEPLIPLLDSPISVVQQLAAELLSHLLLEEHLQKDPVTPKVIAPLIRILGSGIPLLQQRALKALVSIALTWPNEIAKEGGVVEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAESMADSGAIEALLELLRSHQCEEVAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQHARLLATLALGDLFQNEALARTGDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRPNRRAVAEAGGVQVVLDLIGSSNPETSVQAAMFIKLLFSNNTIQEYASSETVRAITATIEKDLWASGTVNEEYLKALNSLLSNFPRLRATEPATLSIPHLVTSLKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPFLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIVKRGNNMRQSVGNPSVYCKITLGNNPPRLTKVVSTGPNPEWEESFTWSFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGAVAGEYTLLPASKSGPPRNLEIEFQWSNKANDTTTDTVQQ | 2178 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre8g04991 | 2178 | SUPERFAMILY | ARM repeat | 1117 | 1582 | IPR016024 | - | |
| Trre8g04991 | 2178 | Gene3D | - | 625 | 1021 | IPR011989 | - | |
| Trre8g04991 | 2178 | PANTHER | PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 | 44 | 2167 | IPR044297 | GO:0008017|GO:0010330|GO:0051211|GO:2001006 | |
| Trre8g04991 | 2178 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2046 | 2154 | IPR035892 | - | |
| Trre8g04991 | 2178 | Gene3D | - | 1382 | 1663 | IPR011989 | - | |
| Trre8g04991 | 2178 | Gene3D | - | 64 | 429 | IPR011989 | - | |
| Trre8g04991 | 2178 | MobiDBLite | consensus disorder prediction | 25 | 72 | - | - | |
| Trre8g04991 | 2178 | Coils | Coil | 312 | 332 | - | - | |
| Trre8g04991 | 2178 | FunFam | Protein CELLULOSE SYNTHASE INTERACTIVE 1 | 1396 | 1630 | - | - | |
| Trre8g04991 | 2178 | Gene3D | - | 1812 | 2044 | IPR011989 | - |
Showing 1 to 10 of 43 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre8g04991 | - | - | cam:101494820 | 3779.18 |
Showing 1 to 1 of 1 entries