Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04971 ATGAGAGCTTCTTCACCCACTCATGTCAAATCCACTCCTTCTTTGGCTGAAGAATACAACTCTTGGATTCTTCGCCATCCATCTGCATTAGACATGTTTGAACAAATTATGGATGCTTCAAAGGGAAAACAGATTGTTATGTTTTTGGACTACGACGGTACTCTGTCGCCTATAGTCGATGATCCTGATCGTGCTTTCATGTCTGAATCGATGAGGAAAACGGTTAGACAACTTGCAAGGTGTTTTCCTACTGCAATTGTTACCGGAAGATGCATAGACAAAGTGTACAATTTTGTTCGTTTGGCTGAACTATATTATGCTGGTAGCCATGGCATGGACATTAAAGGTCCAACAAAAGAGTCCAAATACAACAAAAATAAGAAAGCAGAGGAAATTCTTTTTCAACCTGCCAGAGAATTTGTTCCAATGATAAATGAGGTTTATGATCAACTAGTTGAGAAAACAAAATCAACTCCTGGTGCTAGAGTTGAGAATCACAAATTCTGTGCCTCTGTTCATTTTAGATGTGTTGAGGAAAAGAGATGGGTTGAATTAGCAGAGCAAGTAAAATCAGTGATTAAAGAGTACCCTAAGCTTCGTCTTACACAAGGAAGGAAGGTATTGGAGATTCGTCCCGCAATTAAATGGGACAAGGGCAAGGCCTTAGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTCTTTCCTATTTATATTGGTGATGATAGAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGAATTCTAGTCTCTAAATTTCCAAAGGACACTACTGCCTCATACTCCTTACAAGAACCTAATGAGGTTATGGATTTTCTTCAACGTTTAGTTGAATGGAAAAAAGTATCTTCAAGATCACGTTCACGGGTGTAG 921 0.3876 MRASSPTHVKSTPSLAEEYNSWILRHPSALDMFEQIMDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSESMRKTVRQLARCFPTAIVTGRCIDKVYNFVRLAELYYAGSHGMDIKGPTKESKYNKNKKAEEILFQPAREFVPMINEVYDQLVEKTKSTPGARVENHKFCASVHFRCVEEKRWVELAEQVKSVIKEYPKLRLTQGRKVLEIRPAIKWDKGKALEFLLESLGFANCNDVFPIYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKDTTASYSLQEPNEVMDFLQRLVEWKKVSSRSRSRV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04971 306 Pfam Trehalose-phosphatase 48 282 IPR003337 GO:0003824|GO:0005992
Trre8g04971 306 NCBIfam HAD-IIB family hydrolase 47 258 IPR006379 -
Trre8g04971 306 FunFam Trehalose 6-phosphate phosphatase 45 132 - -
Trre8g04971 306 FunFam Trehalose 6-phosphate phosphatase 137 213 - -
Trre8g04971 306 CDD HAD_TPP 46 286 - -
Trre8g04971 306 Gene3D - 151 305 IPR023214 -
Trre8g04971 306 Gene3D - 45 144 IPR023214 -
Trre8g04971 306 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 302 IPR044651 GO:0004805|GO:0005992
Trre8g04971 306 SUPERFAMILY HAD-like 46 296 IPR036412 -
Trre8g04971 306 FunFam Trehalose 6-phosphate phosphatase 143 302 - -
Trre8g04971 306 NCBIfam trehalose-phosphatase 43 293 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04971 Trre-Chr8 52631394 52633966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04971 41 292 Trehalose Biosynthesis Gene Families AT1G70290 27.076 3.78e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04971 K01087 - gmx:100794430 538.88