Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04967 ATGTCTGATCCAACAACTCCAAAGCATCAGAGACAGAGCTATGCTGATGATTTAGTTAAACATCATCAACGATTTGGTGGCAAAGTGGACGCGTGGAAGGCTGCTCTAACCCAAGTAGCTGGACTCTCTGGCTGGGATTCACAAGTAACCAGACCTGAAAGCACACTTGTTACAGAGATTGTGAAAGACATTGTGAAAAAATTGAATTGTTTTGTCTCAAGTAAAGTTTGGATGCATGATCTAATACGAGATATGGGGCATGGAATTGTTAGGCTTCAAGGTGTCAATGATCCTAGAAAACGTAGTCGATTATGGAAGGCTAGTGATATTTACGATGTTTTAAGCAAGAACATGGGAAAAGGAACAGACGCAATCCACGATCTTGAACAACTTTGGGAGGGGGATCAGGCTTTACCGAATTTGAAAAGGCTTAACCTTATTTATTCTGAGAAATTGATAGCAGTTCCAGACCTCTCTTTGTCTCCAAATATTGAAGAAGTAATTCTTAGTGGTTGTGTAAGTTTGACACAAGTTAACTCCTCTATCTTCCTCAACAAACTTAACATGTTACTTTTAGAAGGTTGTACCGAACTCAAGAGTTTAAATATTTGTAGCAATATTCTATCAAGATCATCTGGATACGTTGCTCTTGGTGGTTGTCACAAGCTTGAAACACTTTTAATCAGCGGGGATTACGATGTTTGGGAACCACTTTCAGATACTTTTCCAAGTATCAGTGATGTTTATTTGAATTTTCTAACAGGACTTTCTCTTAGTGGTTGTTTAAAGTTGGAAGAGTTACCTGAATTCAAGGAAACTATGGAAAATTTAAAAGAGCTCACCTTAGACAAAACATCAATAAAAGAACTACCTTCATCCTTGCACCATTTAGTTGGGCTTGAAAAATTGAGCTTGCAAAGTTGCACAAAGCTCAAGACCATTCCATCTTTTATTGGAAACCTCAGTAAACTCCGTCAGTTAAACCTTGCCAATTGTGCATCACTTAAAACTTTTCCAAGCAGCATTTTCAAATTAAAGTTGAGTGAACTCAACTTCGAAGGTTGCTCAATGCTTCAGACCTTTCCAGAGATCTTGGAGTCTGCAGAAAGTTTTTATCACATTAACCTAACAAAAACCGCAATAAAAGAACTACCTTCATCCTTGCACCATTTAGTTGGGCTTCAAATATTGAGCTTGAAAAGTTGCACAAAGCTTAAGACTATTCCATCTTCTATTGGAAACCTCAGTGAACTCCTCGAGTTAGACGTTTCCTGTTGTGCATCACTTGAAACTTTTCCAAGCAGCATTTTCAAATTGAAGTTGATAGAACTCAATTTTGAAGGCTGTTTAATGCTTCAGACCTTTCCCGAAATACCAAATGACAGTGTCTGCTTGTCATCCTTGACTGAACTTTCACTGCAAGGAAGCAGTATTGTGAACCTTCCCGATAGTATGGCTCTTCTATCAAGTTTGAAATCACTTAATTTAAGTGAGTGTGAATTGCTTGAATGTGTTCCAAAGCTTCCACCAAATCTAGTTCAAGTTTTGGCATGTGATTGCCCTTCCATTAAGAGTATGGTGCTAACTTCAAGGTCTGATACTGAAGAAGGTACTTTCGAATTTCATCTCACCAAAAGTCAAGAACTAGATGCAACATCTTTGAGTAATATTGGAGAGCAAGCATGCATTAAGATCACTGATGATGCATATTGGTCAGTGGTCTTCTGCTTTCCAGGGAGTGCAGTTCCTGGCTGGTTCCATTACTGTTGCAAGGGACATTCAGTAACTATGAAAAAAGTTTCTCCAAATTTGTGCAGTAAAAATAGGCTCATTGGTTTCGCGCTGGGTGCTGTTTTGGGACCAGAAGATATGGATGAGACCCTTGTATATAAATTTGAATTTATATCAGATGTCGAAATGTACACTTCCTACCACTGTTTGCCTGAAAACTATTTGAATTGGAATTGTCCAGATAGATTTCTCAAACAAAATCACACACTCCTGTGGAAGCATGAATTAAACTTACAAGCAATTGGCAACAAGATCTTTCATGCCCAAAACTTCACTTTTGAGTTTTCATCAAAAGACAAAGTGAAAGAATGTGGAATATGTCCTCTGTTTACCAAAGAAATTGATACATTTTTGGCATTTTGGAATTCACAAACACTTTTTATGGCATTTCATGGATTTCTTGACAAAGATGATGTGGGAGATGTGTTTTTGAAGTTTCCCGTATGA 2238 0.3789 MSDPTTPKHQRQSYADDLVKHHQRFGGKVDAWKAALTQVAGLSGWDSQVTRPESTLVTEIVKDIVKKLNCFVSSKVWMHDLIRDMGHGIVRLQGVNDPRKRSRLWKASDIYDVLSKNMGKGTDAIHDLEQLWEGDQALPNLKRLNLIYSEKLIAVPDLSLSPNIEEVILSGCVSLTQVNSSIFLNKLNMLLLEGCTELKSLNICSNILSRSSGYVALGGCHKLETLLISGDYDVWEPLSDTFPSISDVYLNFLTGLSLSGCLKLEELPEFKETMENLKELTLDKTSIKELPSSLHHLVGLEKLSLQSCTKLKTIPSFIGNLSKLRQLNLANCASLKTFPSSIFKLKLSELNFEGCSMLQTFPEILESAESFYHINLTKTAIKELPSSLHHLVGLQILSLKSCTKLKTIPSSIGNLSELLELDVSCCASLETFPSSIFKLKLIELNFEGCLMLQTFPEIPNDSVCLSSLTELSLQGSSIVNLPDSMALLSSLKSLNLSECELLECVPKLPPNLVQVLACDCPSIKSMVLTSRSDTEEGTFEFHLTKSQELDATSLSNIGEQACIKITDDAYWSVVFCFPGSAVPGWFHYCCKGHSVTMKKVSPNLCSKNRLIGFALGAVLGPEDMDETLVYKFEFISDVEMYTSYHCLPENYLNWNCPDRFLKQNHTLLWKHELNLQAIGNKIFHAQNFTFEFSSKDKVKECGICPLFTKEIDTFLAFWNSQTLFMAFHGFLDKDDVGDVFLKFPV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04967 745 Pfam C-JID domain 577 711 IPR045344 -
Trre8g04967 745 Gene3D Ribonuclease Inhibitor 240 373 IPR032675 -
Trre8g04967 745 Gene3D Ribonuclease Inhibitor 110 239 IPR032675 -
Trre8g04967 745 SUPERFAMILY L domain-like 242 554 - -
Trre8g04967 745 SUPERFAMILY L domain-like 78 230 - -
Trre8g04967 745 Gene3D - 1 73 IPR035897 -
Trre8g04967 745 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 246 346 - -
Trre8g04967 745 Gene3D Ribonuclease Inhibitor 374 566 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04967 Trre-Chr8 52611843 52617591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04967 224 506 WRKY Transcription Factor Family AT4G12020 30.897 1.43e-09 60.1