Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04966 ATGCCTCACAGCCATCTTGAACAACTTTGGGAGGCAGATCAGGCTTTACCAAATTTGAAAATACTCAACCTTTTGTATTCTGAGAAGCTGAGAGCAGTACCAGACCTCTCTTTGTGTCCAAATATTGAAGAATTATTGCTTTATGGTTGTTCAAATTTGGAGGAGTTACCTGAAGTGAAGGAGGAGACTATGAAAAATCTAAAAAGGCTAGTGTTAGATGGAACAGCAATAAAAGAACTACCTTCATCCTTAGACCGTTTGGTTGGGCTTGAAGAATTGAGCTTGCAAAGTTGCAGAAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTCAGTAAACTCGTCATGTTAAACCTTTCCTATTGTGAATCACTTGAGACTTTTCCAGAAATACCAAATTACTGCTTGTCATCCTTGACAAAACTTTCACTGCAAGGAAGCGGTATTGTGAACCTTCCCGAAAGTATTGCTCATCTCTCAAGTTTGACATCACTTGGTTTAAGCGATTGCAAAAGGCTTAAATGTGTTCCAAAGCTTCCACCAAATCTAAACCAAGTTTCGGCATTTGATTGCCCTTCCATTAAGAGAATGATGCTAAATTCTGGGTATGACTCCAAAGAAGGTACCTTCGAATTTCATCTGACCAATAGTCAAGAACTAGATGCTACTTGTTTGAGTAATATTGAAGAGGAAGCATATATTAAGATCAATGATGATGCATATTGGTCAGTGTTGTTCTGTTATCCAGGAAGTGCAGTTCCTCGCTGGTTCCCTTACTCTTGCAAGGGAAATCCAGTAACTATAAAGAACAATTCTACAAATAGGCTGACTGGTTTAGCTTTGTGTGTTGTTTTGGGACGAGGATGTATTAGAGATGGCACGAGATTTAAGTACAGGATTGGAATTATATCAGATCGGGAAACACACTATTCTAACCACTCTACGGAAGATCACACAGTCCTATGGAAGGGCAAATTATTTGATTCGGCCATTTGGAGATATGGCTTAAGATTTCTCAATGAAGATCACACAGTCCTATGGAAGCACGAGCACTTTCATGCCCAACACTTCTCTTTTGAGTTTACACCAGATGAATCTGACAATGATTGCGTCTACACAGTCTACGTTCGAACCGGTTCAATCTTAAAAGGAGGAACCGATTCAAAGATCGGAGTCAAACTATACAACAAATACGGTTCTTACATCTACATCAAGAACCTCGTTGCATGGGGCGGGTTAATGGGTTCGGGTTATAATTACTTCGAACGTAGTAACCTTGATATCTTTAGCGGAAGAGGACCTTGTCTAGACGGACCCGTTTGTGCCGTTAATGTTACATCTGATGGTGACGGCGCACATCACGGTTGGTATTGTAACTACGTCGAAGTTACTAGTACTGGGCCCCACGTATCGTGTTCTCAGGAGCAATTCACGGTGGAACAGTGGCTAGCGACTGATACTAGTCCTTATCAGTTATGGGCCGTGAGGAATCTTTGCCAGTATAAGTTGGATTCGGCCCGGCCCAAAATCGGCCCATCTGTTGTTAACGACGGAAGTGGATCTGATTTTTCTATTTTGAATGCCCACGCTTGA 1593 0.4137 MPHSHLEQLWEADQALPNLKILNLLYSEKLRAVPDLSLCPNIEELLLYGCSNLEELPEVKEETMKNLKRLVLDGTAIKELPSSLDRLVGLEELSLQSCRKLKTIPSSIGNLSKLVMLNLSYCESLETFPEIPNYCLSSLTKLSLQGSGIVNLPESIAHLSSLTSLGLSDCKRLKCVPKLPPNLNQVSAFDCPSIKRMMLNSGYDSKEGTFEFHLTNSQELDATCLSNIEEEAYIKINDDAYWSVLFCYPGSAVPRWFPYSCKGNPVTIKNNSTNRLTGLALCVVLGRGCIRDGTRFKYRIGIISDRETHYSNHSTEDHTVLWKGKLFDSAIWRYGLRFLNEDHTVLWKHEHFHAQHFSFEFTPDESDNDCVYTVYVRTGSILKGGTDSKIGVKLYNKYGSYIYIKNLVAWGGLMGSGYNYFERSNLDIFSGRGPCLDGPVCAVNVTSDGDGAHHGWYCNYVEVTSTGPHVSCSQEQFTVEQWLATDTSPYQLWAVRNLCQYKLDSARPKIGPSVVNDGSGSDFSILNAHA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04966 530 ProSiteProfiles PLAT domain profile. 370 497 IPR001024 GO:0005515
Trre8g04966 530 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 348 502 - -
Trre8g04966 530 SUPERFAMILY L domain-like 10 223 - -
Trre8g04966 530 Pfam PLAT/LH2 domain 372 490 IPR001024 GO:0005515
Trre8g04966 530 Gene3D Ribonuclease Inhibitor 2 202 IPR032675 -
Trre8g04966 530 Gene3D PLAT/LH2 domain 350 489 - -
Trre8g04966 530 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 371 488 IPR036392 GO:0005515
Trre8g04966 530 CDD PLAT_plant_stress 370 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04966 Trre-Chr8 52603575 52607577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04966 19 206 WRKY Transcription Factor Family AT4G12020 37.766 4.41e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04966 - - tpra:123916959 317.775