Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04964 ATGGAAGTTCTCAAAGATAGGTGCCTTATATTTATTTCAGATGGTCGTATTTGGATGCATGATCTAATAAAAGAAATGGGGCAAGCAATTGTTCTGCTTGAAGATGATCCTAGAAAGCGTAGTCGATTATGGAAAACTAATGATATTTATGATGTTTTAAGTAAGAAGAAGGGAAAGGGAACAGATGCAATCAAGGGTATATTTCTAGACATGATGGAAATAAAGAAAATACAACTAGATGCTGATACATTCAATGAAATGCATAATCTTAGAATGATCAACTTCCATAGTGGCAACTGGTGGGATGGCTCAAAGTCAAATGTGACCTGTTTGGATCATTTAAAATTTCCGAATAATTTAAAACTTCTTCATTGGGATAGCTTCCCTCAAAGATCATTGCCGCAAGACTCTTGGCCAGAAGATCTCATTGTGGTTGAAATGCCTCACAGCCATCTTGAACAACTTTGGGAGGGAGATCAGGTTTTACCAAATTTGAAAAGGCTTGACCTTAGTTATTCTGAGAAGCTGATAGCAGTTCCCGACCTCTCTTTCTCTCCAAATATTGAAGAAGTAATTCTTACTGAATGTGTAAGTTTGACACAAGTTTACTCCTCTTGCTTCCTCAACAAACTTAACTTCTTATGTTTAGAATCTTGTACCGAACTCAAGAGTATTAATATTCCTAGCAATATTCTATCAAGATCATCTGGATTTGTTTCTCTCCATGATTGTCATAACCTTGACACACTTTTAATCAGCAGTAGAATTGATCATGTGGTTCAATCATATAAATTTTTTTATGGATATTCTATGGTCCAAGAAATGGAAGATTTTTGTGATGAAATGGGAATAGAGTTACGGTTGAATGATGAAGGGGATTATGAGATTTGCGAATCATTTTCAGACACTCTTTCAAGAAATAGAATCAATGAGTTTTGTTGGATAGATGTTTCAAATTGTGGGTCCTTAACATGCCTACCAGCTGAACTTTTAAATTCGAAGTTTCTAACAGGACTTTCTCTTCGTGGTTGTTTAAAGTTGGAAGAGTTACCTGAAATCATGGAGATTATGGAAAATTTAAAAGTGCTCAACTTAGACGAAACATCAATAAAAGAACTACCTTCATCCTTGCACCATTTAGTTGGGCTTCAAAAATTGAGCTTGAGAAATTGCACAAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTAAGTAAACTCTTATGGTTAGACCTTCACTACTGTAAGTCACTTGAAACTTTTCCAAGCAGCATTTTCAAATTGAAGTTGACAAAACTCGATTTCCTGTTTTGCTCAATGCTTGCGACCTTTCCAGAAATACCAAATGACATTGGTCGCTTGTCCTCCTTGACTGAACTTTCACTGCGAGGAAGTAGTATTGTGAACCTTTCTGAGAGTCTGGCTCTTTTATCAAGTTTGAAATCACTTGATTTAAGTGATTGCAAATTGCTTGAATGTGTACCAAAGCTTCCACCAAATCTAAACCAAGTTTTGGCATTTGATTGCCCTTCCATTAAGAGAATGATGCTAAACTCAAGGTCTGATTCCGAAAAAGGTAGCTTCAAATTTCATCTGACCAATAGTCAAGAACTAGATGCTACTTGTTTGAGTAATATTGAAGAGGAAGCATATATTAAGATCAATGATGATGCATATAAGTCAGTGTTGTTCTATTATCCAGGAAGTGCAGTTCCCCATTGGTTCTCTCACCGATGCCAGGGACATTCAATAACTATAAGAACCGATCATTTAAATTTGTACGGGGGAAACAAGCTTCTTGGTTTCGCTCTGTGTGTGGTTTTGGGACCTGACTTTCCATGCAAATTGTCTTTGTTTAATCCTGGCTTTAGATACGAATTAAAATTTGAATCTGATGGTCAAACACACTTTCATCCTAAGAACAAGCTTGAACTTGTATCGCTAGGTCATAGTAAAAGATTTGCCCATCATCACACATTCCTATGGAAGTATGAATTGGACTTGCCAACAATTGGCAACGGGCAAAGTACGGAGCGGGAAATGTAG 2046 0.3661 MEVLKDRCLIFISDGRIWMHDLIKEMGQAIVLLEDDPRKRSRLWKTNDIYDVLSKKKGKGTDAIKGIFLDMMEIKKIQLDADTFNEMHNLRMINFHSGNWWDGSKSNVTCLDHLKFPNNLKLLHWDSFPQRSLPQDSWPEDLIVVEMPHSHLEQLWEGDQVLPNLKRLDLSYSEKLIAVPDLSFSPNIEEVILTECVSLTQVYSSCFLNKLNFLCLESCTELKSINIPSNILSRSSGFVSLHDCHNLDTLLISSRIDHVVQSYKFFYGYSMVQEMEDFCDEMGIELRLNDEGDYEICESFSDTLSRNRINEFCWIDVSNCGSLTCLPAELLNSKFLTGLSLRGCLKLEELPEIMEIMENLKVLNLDETSIKELPSSLHHLVGLQKLSLRNCTKLKTIPSSIGNLSKLLWLDLHYCKSLETFPSSIFKLKLTKLDFLFCSMLATFPEIPNDIGRLSSLTELSLRGSSIVNLSESLALLSSLKSLDLSDCKLLECVPKLPPNLNQVLAFDCPSIKRMMLNSRSDSEKGSFKFHLTNSQELDATCLSNIEEEAYIKINDDAYKSVLFYYPGSAVPHWFSHRCQGHSITIRTDHLNLYGGNKLLGFALCVVLGPDFPCKLSLFNPGFRYELKFESDGQTHFHPKNKLELVSLGHSKRFAHHHTFLWKYELDLPTIGNGQSTEREM 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04964 681 Gene3D Ribonuclease Inhibitor 271 444 IPR032675 -
Trre8g04964 681 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 287 517 IPR044974 GO:0006952
Trre8g04964 681 Pfam Leucine Rich Repeat 142 160 IPR011713 -
Trre8g04964 681 SUPERFAMILY L domain-like 313 539 - -
Trre8g04964 681 SUPERFAMILY L domain-like 84 254 - -
Trre8g04964 681 Pfam C-JID domain 566 641 IPR045344 -
Trre8g04964 681 Gene3D Ribonuclease Inhibitor 36 268 IPR032675 -
Trre8g04964 681 Gene3D Ribonuclease Inhibitor 445 546 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04964 Trre-Chr8 52568269 52571970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04964 357 520 WRKY Transcription Factor Family AT4G12020 30.178 8.66e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04964 - - tpra:123916959 691.419