Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04963 ATGAATGTTCTTGAAGATAGGTCCCTTATATCTATTTCAAAAGACAGAATTTGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTCGGCTTCAATGCAAAAATGATCCTAAAAAATGGAGTCGATTATGGAAGCCTGACGATATTTATAACGTTTTCAAAAACGACATGGGAAAGGGAACAGATGCAATCCAATGTATATTTCTGGACATGGACGAAATTAAGGAAGTTCAACTACATGCTAAAACTTTTAAGAAAATGCATAATCTTAGAATAATAGAATTCCTTAATCCCGACAGTTCAATTGCAAATGTGACCTTTCATGCATCTCTTGAGAGTCTTCCGAATGCTTTAAAAATTCTTCATTGGGAGAGCTTCCCTAAACAATCTTTACCGCAAGACTTTTGCCCAAAAAATCTTGTTAGACTTGATATGCCTAACAGCAAACTTGAACAACTTTGGGAGTCGAATCAGGATTTACCAAATTTGAAAAGGCTTAACCTTAGCGGTTCTGAGGAGCTAATAAGAGTACCAGACCTCTCTTTGTTTCCAAATATTGAAGAAGTAATTCTTAGTGGCTGTGAAAGTTTGAAAAAAGTTTACTCATCTAGGTTCCTCGACAACCTTAACTGGTTATGTTTAGATGATTGTACTAAACTTGAGAGGTTAGATATTCGTAGCAATATTCTATGGAGATCATCTGGATTAGTAGCTCTTCATGGTTGTCACAACCTTGAAACACTTTTAATCAACAGTAGAACTGATGTGGTTCAATCAGACAGTTGCCCTCCTTTTAATCGTTATTGTGAATTCCTGTCAGTATGTGTTTTTGATAATGAAATGTACATACAGTGTGATGCTGAACTTCTAAATTTGAAGTTTCTAAGAAGACTTTCTCTCAGCGGTTGTTTGAAGTTGGAAGAGTTACCTGAAATCAATGAGACTATGGAAAATCTAAAAGTGCTCATCTTAGAGTTTACAGCAATAAAAGAACTACCTTCATCTTTAGACCATTTGGTCGGGCTAGAAGAATTAAGCTTGCACAGTTGCACAAAGCTCAAGACTATTCCATCTTCTATTGGAAACCTTAGTAAACTCCTTAAGTTAAACCTTGCCTATTGTGCATCACTTGAAAGTTTTCCAAGCAGCATTTTCAAACTGAATTTGACAGAACTCAATTTCGAAGGTTGCTCAATGCTTCAGACCTTTCCTGAAATACCAAATGACAGTGTCTGCTTGTCATCCTTGATTGAACTTTCACTGCAACGAAGCAGTATTGTGAACCTTCCTGAGAGTGTGGCTCATCTGTCAAGTTTGAGATCACTTGATTTAAGTGATTGCAAATTGCTTGAATGTATTCCAAAGCTTCCACCAAATATAAACGAATTTTGGGCATTTGATTGCCCTTCCATTAAGAGAATGATGCTAAGTTCAAGGTCTGATTCCGAAGAAGGAAGTATTGCAGTTCCTCATTGGTTCTCTCAGTCTCACCGATGCCAGGGACATTCAATAACAATAAGAAAGGATGATTTAAATTTGTACGGGAGAAACATGCGTATTGGTTTCGCAATGTGTGTGGTTTTGGGACCTGACTTTCCATTCAAATTCTCTTCGCATAATTTTAGCTTTAGATACGAATTAAAATTTGAATCCGATGATCAAAGACACTTTCATCCCAAGGTTGAAGTTGAACATCATATAGAGGGAAGATTTGCGCAACATCACACATTCCTTTGGAAGTATGAATTGGACTTGCCAAGAATTGATGCCGAGACTATCACTTTTGAGATCGTAGATGAGCATTGTCGTCCCTTAAGTTTTCCAACAACCATGACGGTGAAAGAATGTGGAATATATCCTCTGTATATCAAAGAAAATGATGATGCTGACGATGCTGCTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGGTGGTGGTGGTGGTGGTGATGGTGATGGGATTGAAGTGTGTTTGCTGGATCTCTTACCAAGTGACAATTACACACAAAATAAAAGAAGAAAAAAGTAA 2049 0.3704 MNVLEDRSLISISKDRIWMHDLIQEMGHEIVRLQCKNDPKKWSRLWKPDDIYNVFKNDMGKGTDAIQCIFLDMDEIKEVQLHAKTFKKMHNLRIIEFLNPDSSIANVTFHASLESLPNALKILHWESFPKQSLPQDFCPKNLVRLDMPNSKLEQLWESNQDLPNLKRLNLSGSEELIRVPDLSLFPNIEEVILSGCESLKKVYSSRFLDNLNWLCLDDCTKLERLDIRSNILWRSSGLVALHGCHNLETLLINSRTDVVQSDSCPPFNRYCEFLSVCVFDNEMYIQCDAELLNLKFLRRLSLSGCLKLEELPEINETMENLKVLILEFTAIKELPSSLDHLVGLEELSLHSCTKLKTIPSSIGNLSKLLKLNLAYCASLESFPSSIFKLNLTELNFEGCSMLQTFPEIPNDSVCLSSLIELSLQRSSIVNLPESVAHLSSLRSLDLSDCKLLECIPKLPPNINEFWAFDCPSIKRMMLSSRSDSEEGSIAVPHWFSQSHRCQGHSITIRKDDLNLYGRNMRIGFAMCVVLGPDFPFKFSSHNFSFRYELKFESDDQRHFHPKVEVEHHIEGRFAQHHTFLWKYELDLPRIDAETITFEIVDEHCRPLSFPTTMTVKECGIYPLYIKENDDADDAADDDDDDDDDDDDDDDGGGGGGDGDGIEVCLLDLLPSDNYTQNKRRKK 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04963 682 MobiDBLite consensus disorder prediction 630 662 - -
Trre8g04963 682 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 318 471 IPR044974 GO:0006952
Trre8g04963 682 Gene3D Ribonuclease Inhibitor 56 274 IPR032675 -
Trre8g04963 682 Gene3D Ribonuclease Inhibitor 314 497 IPR032675 -
Trre8g04963 682 MobiDBLite consensus disorder prediction 630 655 - -
Trre8g04963 682 Pfam Leucine Rich Repeat 141 157 IPR011713 -
Trre8g04963 682 SUPERFAMILY L domain-like 278 475 - -
Trre8g04963 682 SUPERFAMILY L domain-like 66 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04963 Trre-Chr8 52555043 52557946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04963 315 481 WRKY Transcription Factor Family AT4G12020 32.558 4.46e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04963 - - psat:127102224 551.592