Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04962 ATGGAAAATCTAAAAGTGCTCATCTTAGAGTTTACAGCAATAAAAGAACTACCTTCATCTTTAGACCATTTGGTCGGGCTAGAAGAATTAAGCTTGCACAGTTGCACAAAGCTCAAGACTATTCCATCTTCTATTGGAAACCTTAGTAAACTCCTTAAGTTAAACCTTGCCTATTGTGCATCACTTGAAAGTTTTCCAAGCAGCATTTTCAAACTGAATTTGACAGAACTCAATTTCGAAGGTTGCTCAATGCTTCAGACCTTTCCTGAAATACCAAATGACAGTGTCTGCTTGTCATCCTTGATTGAACTTTCACTGCAACGAAGCAGTATTGTGAACCTTCCTGAGAGTGTGGCTCATCTGTCAAGTTTGAGATCACTTGATTTAAGTGATTGCAAATTGCTTGAATGTATTCCAAAGCTTCCACCAAATATAAACGAATTTTGGGCATTTGATTGCCCTTCCATTAAGAGAATGATGCTAAGTTCAAGGTCTGATTCCGAAGAAGGTACCTTTAAATTTCTTCTGACCAATAGTCAAGAACTAGATGATACTTCTTTGAGTAATATTGAAGAGGAAGCACGTATTAAGATCAATGATGATGCATATAGGTCAGTGTTCTTCTGTTTTCCAGGAAGTATTGCAGTTCCTCATTGGTTCTCTCAGTCTCACCGATGCCAGGGACATTCAATAACAATAAGAAAGGATGATTTAAATTTGTACGGGAGAAACATGCGTATTGGTTTCGCAATGTGTGTGGTTTTGGGACCTGACTTTCCATTCAAATTCTCTTCGCATAATTTTAGCTTTAGATACGAATTAAAATTTGAATCCGATGATCAAAGACACTTTCATCCCAAGGTTGAAGTTGAACATCATATAGAGGGAAGATTTGCGCAACATCACACATTCCTTTGGAAGTATGAATTGGACTTGCCAAGAATTGATGCCGAGACTATCACTTTTGAGATCGTAGATGAGCATTGTCGTCCCTTAAGTTTTCCAACAACCATGACGGTGAAAGAATGTGGAATATATCCTCTGTATATCAAAGAAAATGATGATGCTGACGATGCTGCTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGGTGGTGGTGGTGGTGGTGATGGTGATGGGATTGAAAAAATGATGATAATGGCAATGAAGTACCGTGTGCAAGCAGAGCTGCACAATAATCAACCTTCGACTCCAATATTTCAGACACTTTTTAGACACAACTCAGAAACATCATTTTCTGCACTTCAAGGAGAACACAAGACATCGCAAATTGTTAGAGGCTGCTCATTTTATTTGTATCTGTGA 1341 0.3818 MENLKVLILEFTAIKELPSSLDHLVGLEELSLHSCTKLKTIPSSIGNLSKLLKLNLAYCASLESFPSSIFKLNLTELNFEGCSMLQTFPEIPNDSVCLSSLIELSLQRSSIVNLPESVAHLSSLRSLDLSDCKLLECIPKLPPNINEFWAFDCPSIKRMMLSSRSDSEEGTFKFLLTNSQELDDTSLSNIEEEARIKINDDAYRSVFFCFPGSIAVPHWFSQSHRCQGHSITIRKDDLNLYGRNMRIGFAMCVVLGPDFPFKFSSHNFSFRYELKFESDDQRHFHPKVEVEHHIEGRFAQHHTFLWKYELDLPRIDAETITFEIVDEHCRPLSFPTTMTVKECGIYPLYIKENDDADDAADDDDDDDDDDDDDDDGGGGGGDGDGIEKMMIMAMKYRVQAELHNNQPSTPIFQTLFRHNSETSFSALQGEHKTSQIVRGCSFYLYL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04962 446 MobiDBLite consensus disorder prediction 355 380 - -
Trre8g04962 446 SUPERFAMILY L domain-like 2 180 - -
Trre8g04962 446 MobiDBLite consensus disorder prediction 355 385 - -
Trre8g04962 446 Gene3D Ribonuclease Inhibitor 1 196 IPR032675 -
Trre8g04962 446 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04962 Trre-Chr8 52553339 52556266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04962 12 168 WRKY Transcription Factor Family AT4G12020 32.022 1.29e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04962 - - tpra:123916959 482.641