Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04952 ATGAAAAATCTAAAAAGGCTATGGTTAGGTGGAACAGCAATAAAAGAACTACCTTCATCCTTAGACCGTCTGGTCGGACTTGAAATATTGAACTTGCAATGTTGCACAAAACTTAAGACTATTCCATCTTCCATTGGAAATCTCAATAAACTCGTCATGTTAAACCTTGCCTTTTGTGAATCACTTGAGACTTTCCCAGAAATACCAAATTACTGCTTGTCATCCTTGACTGAACTTTCACCGGAAGAAACGAGTATTGAGAACCTTCCAGAGAGTATGGCAAATCTCTCAAGTTTGGAATCACTTGATTTAAGTTATTGCAAACGGCTTGAATGTGTCCAAAATAACATTGGTCACTTGTCATCCTTGACCGAACTTGTACTGCAAGGAAGCAGTATTGTGAACCTTCCCGAAAGTATTGCTCATCTCTCAAGTTTGACATCACTTGGTTTAACCCTTTGCAAAAGGCTTAAATGTGTTCCAAAGCTTCCACCAAATCTAAAGAGAGTTTGGGCATTGTATTGCCCTTCCATTAAGAGAATGATGCTAAGTTCAAGGTCTTATTCCAAAGAAGGTACCTTCGAATTTTATCTGACCAATAGTCAAGAACTAGATGCCACATCTTTGAGTAATATTGGAGAGGAAGCATGTATCAAGATCACTGATGATGCATATAGGTCAGTGGTCTTCTGTTTTCCAGGGAGTGCAGTTCCTCGCTGGTTCCATTACTGTTGCAAGGGGCATTCAGTAACTTTGAAAGAAGTTTCTCCAAATTTGTGCAGTAAAAATAGGCTTATTGGTTTTGCTCTGTGTGCTATTTGGAGACCAGGTCCAGGATATCATGGAAAAGCTAATTACAAATTTGGATTTACATCAGATGGTAAAATATACTCTTCTGACCATTATATACCTGATATATTTGGCACTTTGAATTTGGATCACACACTCCTATGGAAGCATCAATTAGACTTGGAAACAATTGGCAACAAGCTCTTTCATGCCCAAAACTTCACTTTTGAGTTTCCAGCAAATGTCAAAGTGAAAGAATGTGGAATATGTCCTCTGTATACCAGAAGAATTGATGATAATAGCATTGAAGAAACAAGTGGGAGCAAAGCTGCAGAATAA 1128 0.3821 MKNLKRLWLGGTAIKELPSSLDRLVGLEILNLQCCTKLKTIPSSIGNLNKLVMLNLAFCESLETFPEIPNYCLSSLTELSPEETSIENLPESMANLSSLESLDLSYCKRLECVQNNIGHLSSLTELVLQGSSIVNLPESIAHLSSLTSLGLTLCKRLKCVPKLPPNLKRVWALYCPSIKRMMLSSRSYSKEGTFEFYLTNSQELDATSLSNIGEEACIKITDDAYRSVVFCFPGSAVPRWFHYCCKGHSVTLKEVSPNLCSKNRLIGFALCAIWRPGPGYHGKANYKFGFTSDGKIYSSDHYIPDIFGTLNLDHTLLWKHQLDLETIGNKLFHAQNFTFEFPANVKVKECGICPLYTRRIDDNSIEETSGSKAAE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04952 375 PANTHER LEUCINE-RICH REPEAT-CONTAINING 4 205 - -
Trre8g04952 375 SUPERFAMILY L domain-like 2 204 - -
Trre8g04952 375 Pfam C-JID domain 232 359 IPR045344 -
Trre8g04952 375 Gene3D Ribonuclease Inhibitor 1 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04952 Trre-Chr8 52487242 52488369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04952 1 186 WRKY Transcription Factor Family AT4G12020 30.890 7.06e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04952 - - tpra:123916959 313.153