Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04951 ATGTGGAAGGCTGCTCTAACCCAAGTAGCTGGACTCTCTGGCTGGGATTCACAAGTAACCAGAGAAGAAAATACACTTGTTACAGGGATTGGGAAAGATATTTTGAAAAAATTGAATCATCCTGGAAAACGTAGCCGATTATGGAAGTCCGACGATATTTATAAAGTTTTTAAAAAGGACAAGGGAAAGGGAACAGATGCAATCCAGTGTATATTCCTAAACATGGATGAAGTAAAGGAAGTTCAACTACATGCTGATACATTTAAGAAAATGCACAATCTTAGAATGATCAACCATCTTGAATTACTTTGGGACGGGGATCAGGCTTTACCAAATTTGAAAAAGCTTCAGCTTAGCCATTCTCGGAAGCTAAAAAGACTGCCAGACCTCTCTTTATGTTCAAATATTGAAGAAGTAGTTCTTAGTGGTTGTGTAAGTTTGACAGAAGTTTACTCTTCTAGCTTCCTCGACAATCTTAACTGGTTACGTTTAGATGGTTGTATCAATCTTGAGAGGTTAGATATACGTAGCAATATTTTGTGGACATCATCTGGATTAGTTGCTCTCGGTGGTTGTCACAACCTTCAAACACTTTTAATCAATTGTAAAACTGATGTGCTTCAATCAAACAGTTGGACCCCCTTTAATCAAGACATATCAGTAAGCATTTTTGATGGAGTGATATTAAAGAATTATGGTGCAGGGGGTTACGAGATTTGGAAACTTTATCCATATAGCTTTACAGGTATAAATGAGTTTTGTTGGTTAGATGTTTCGAATTGTAGGTCCATAACCTGCCTACCAGCTGAACTTTTAAATTTGAAGTTTCTAACAAGACTTTCTCTCAGTGGTTGCTTAAAGTTGGAGCAATTGCCTAAAATCGAGGAGACCATGGAAAATCTAAAAGTGCTCATCTTAAACAAAACAGCAATAAAAGAACTACCTTCATCCTTACACCTTTTGGTCAACCTAGAAGAATTGAGCTTGCAAAGTTGCACAAAACTTAAGATTATTCCACCTTCCATTGGAAATCTCAGTAAACTCCTCAAGTTAGACATTGCATATTGTGTATCACTTGAAACTTTTCCATGCAGCATATTCAAATTGAAGTTGAGAGAACTCAATTTTGAGGGTTGCTCAATGCTTAAGACATTTCCAGAGATCTTGGAGTCTACAGAAAGTTTTACTCACATTAACTTAACACGAACAGCAATAAAAGCACTACCTCATTCCTTGCAACTTTTATTCCAACTTGAAGAATTGACCTTGCGAGGTTGCACAAAGCTCAAGACTATTCCATCTTCCATTGGAAACCTCAGCAAACTCCTCAAGTTAGACTTTGCCTATTGTGTATCACTTGAAACTTTTCCATGCAGCATATTCAAATTGAAGTTGAGAGAACTCGATTTCGAGGGTTGCTCAAGGCTTAGGACATTTTCACGGATCTTGGAGCTTGCAGAAAGTTTTAAACACATTAACTTAACACGAACATCAATTAGAAAACTACCTTCATCCTTGCAACTTTTGAAACAACTTGAAGTATTGAGGATGCGACGTTGCACAATGCTCAAGACTATTCCATCTTCCATTGGAAATCTCAGCAAACTCCTCAAGTTAGACCTTGCCTATTGTGTATCACTTGAAACTTTTCCATGCAGCATATTCAAATTGAAGTTGAGAGAACTCGATTTCGAGGGCTGCTCAATGCTTAGGACATTTCCAGAAATCTTCGAGCCTGCAGAAAGTTTTACTCACATTAACTTATCACAAACAGCAATAAGAGAACTACCTTCATCCTTGCAACTTTTGTTACAACTTGAAGAATTGAGCTTGCGATGTTGCACAAAGCTCGAGACTATTCCATCTTCCATTGGGAATCTCAGCAAACTCCTCAAGTTAGACCTTGCATATTGTGTATCACTTGAAACATTTCCGTGCAGCATATTCAAATTAAAGTTGAGAGAACTCGATTTCGAGGGTTGCTCAATGCTTAGAACATTTCCAGAGATCTTAGATCGTGCAGAAAGTTTTACTCACATTAACTTATCACAAACAGCAATTGAAGAACTACCTCCATCCTTGCAACTTTTGTTCCAGCTTGAAGAATTGAGGATGCGAGGTTGCACAAAGCTCAAGACTATTCCATCTTCCATTGGAAATCTCAGCAAACTCCTCAAGTTAGAACTTGCCTATTGTGTATCACTTGAAACTTTTCCATGCAGCATATTCAAATTGAAGTTAAAAGAACTCGATTTCGAGGGTTGCTCAATGCTTAGAACATTTCCAGAGATCTTAGATCGTGCAGAAAGTTTTACTCACATTAACTTATCACAAACAGCAATAAAAGAACTACCTCATTCCTTGGAACTTTTGTTCCAGCTTGAAGAATTGAGGATGCGAGGTTGCACAAAGCTCAAGACTATTCCATCTTCCATTGGAAATCTCAGTAAACTCCTCAAGTTAGAACTTGCCTATTGTGTATCACTTGAAACTTTTCCATGCAGCATATTCAAATTGAAGTTAAAAGAACTCGATTTCGAGGGTTGCACAATGCTTAGAACATTTCCAGATATCTTAGATCGTGCAGAAAGTTTTACTCACATTAACTTATCACAAACAGCAATTGAAGAACTACCTCCATCCTTGCAACTTTTGTTCCAGCTTGAAGAATTGAGGATGCGAGGTTGCACGAAGCTCAAGACTATTCCATCTTCCATTGGAAATCTCAGCAAACTCCTCAAGTTAGAACTTGCCTATTGTGTATCACTTGAAACTTTTCCAAGCAGCATATTCAAATTGAAGTTAAAAGAACTCGATTTCGAGGGTTGCTCAATGCTTAGAACATTTCCAGAGATCTTAGATCATGCAGAAAGTTTTACTCACATTAACTTATCACAAACAGCAATAAAAGAACTACCTCATTCCTTGGAACTTTTGTTCCAGCTTGAAGAATTGAGGATGCGAGGTTGCACAAAGCTCAAGACTATTCCATCTTCCATTGGAAATCTCAGTAAACTCCTCAAGTTAGAACTTGCCTATTGTGTATCACTTGAAACTTTTCCATGCAGCATATTCAAATTGAAGTTAAAAGAACTCGATTTCGAGGGTTGCTCAATGCTTAGAACATTTCCAGAGATCTTAGATCGTGCAGAAAGTTTTACTCACATTAACTTATCACAAACAGCAATAAAAGAACTACCTCCATCCTTGCAACTTCTGTTCCAGCTTGAAGAATTGAGAATGCGAGGTTGCACAAAGCTCAAGACTATTCCATCTTCCATTGGAAATCTCAGCAAACTCCTAAAGTTAGACCTTGCCTATTGTGTATCTCTTGAAACTTTTCCATGCAGCATATTCAAATTGAGGTTAAGAGAACTCAATTTTGACGGTTGCTCAATGCTTAGGACCTTTCCAGAATCTAGTAGCCACCATACCTTTCCAAAGATCTTGGAGCATGCAGAAAGTTTTACTCACATTAACTTAACACAAACAACATTTGAAGATTTGCCTTTATCATTGGAGTATTTAGTTGGGCTTCACAGATTGAACCTGAAGCTTTGTAAAATCCCAAATAACATTGGTTTCTTGTCATCTGTGATTGAACTTTCACTGCAAGGAAGTAGTATTGTGAGCCTTCCTGAGAGTATGGATCATTTCTCAAGTTTGAAATCACTTGATTTAAGTGATTGCAAATTCCTTGAATGTGTTCCAAAGCTTCCACCAAATCTAAACCAAGTTTGGGCATTTGATTGCCCTTCCATTAAGAGTATGGTGCTAAATTCAAGGTCTGATCCCGGAGAAGGTACTTTCAAATTTCATCTGACCAATAGCCAAGAACTAGATGCTACTTCTTTGAGTAATATTGGAGAGGAAGCACATATTAAGATCAATGATGATGCATATTGGTCGGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGGCTGGTTCCATTACTGTTGCAACAAGGGACATTCAGTAACTATGAGAAAAGTTTCTCCAAATTTGTTCAGTAAAAATATGCTAATAGGTTTCAGTCTGTGTGCTGTTTTGGATGACATGAGAACAAGATATTCTGGATTAAGTCCTGCTGATATATTTCTCAAGCTAGATGACACATTCCTATGGAAGCATCAATTAGACTTAAAAACAATTGGCAACAAGCTCTTTCATGCCCACAGCTTCACTTTTGAGTTTCAATCAGATTTCAAAGTGAAAGAATTTGGAATGTTTCCTGTGTATACCAAAAGAATTGATGATAATAGACTGACCAAAAGAAGAAAAAAAAATTGA 4293 0.375 MWKAALTQVAGLSGWDSQVTREENTLVTGIGKDILKKLNHPGKRSRLWKSDDIYKVFKKDKGKGTDAIQCIFLNMDEVKEVQLHADTFKKMHNLRMINHLELLWDGDQALPNLKKLQLSHSRKLKRLPDLSLCSNIEEVVLSGCVSLTEVYSSSFLDNLNWLRLDGCINLERLDIRSNILWTSSGLVALGGCHNLQTLLINCKTDVLQSNSWTPFNQDISVSIFDGVILKNYGAGGYEIWKLYPYSFTGINEFCWLDVSNCRSITCLPAELLNLKFLTRLSLSGCLKLEQLPKIEETMENLKVLILNKTAIKELPSSLHLLVNLEELSLQSCTKLKIIPPSIGNLSKLLKLDIAYCVSLETFPCSIFKLKLRELNFEGCSMLKTFPEILESTESFTHINLTRTAIKALPHSLQLLFQLEELTLRGCTKLKTIPSSIGNLSKLLKLDFAYCVSLETFPCSIFKLKLRELDFEGCSRLRTFSRILELAESFKHINLTRTSIRKLPSSLQLLKQLEVLRMRRCTMLKTIPSSIGNLSKLLKLDLAYCVSLETFPCSIFKLKLRELDFEGCSMLRTFPEIFEPAESFTHINLSQTAIRELPSSLQLLLQLEELSLRCCTKLETIPSSIGNLSKLLKLDLAYCVSLETFPCSIFKLKLRELDFEGCSMLRTFPEILDRAESFTHINLSQTAIEELPPSLQLLFQLEELRMRGCTKLKTIPSSIGNLSKLLKLELAYCVSLETFPCSIFKLKLKELDFEGCSMLRTFPEILDRAESFTHINLSQTAIKELPHSLELLFQLEELRMRGCTKLKTIPSSIGNLSKLLKLELAYCVSLETFPCSIFKLKLKELDFEGCTMLRTFPDILDRAESFTHINLSQTAIEELPPSLQLLFQLEELRMRGCTKLKTIPSSIGNLSKLLKLELAYCVSLETFPSSIFKLKLKELDFEGCSMLRTFPEILDHAESFTHINLSQTAIKELPHSLELLFQLEELRMRGCTKLKTIPSSIGNLSKLLKLELAYCVSLETFPCSIFKLKLKELDFEGCSMLRTFPEILDRAESFTHINLSQTAIKELPPSLQLLFQLEELRMRGCTKLKTIPSSIGNLSKLLKLDLAYCVSLETFPCSIFKLRLRELNFDGCSMLRTFPESSSHHTFPKILEHAESFTHINLTQTTFEDLPLSLEYLVGLHRLNLKLCKIPNNIGFLSSVIELSLQGSSIVSLPESMDHFSSLKSLDLSDCKFLECVPKLPPNLNQVWAFDCPSIKSMVLNSRSDPGEGTFKFHLTNSQELDATSLSNIGEEAHIKINDDAYWSVFFCFPGSAVPGWFHYCCNKGHSVTMRKVSPNLFSKNMLIGFSLCAVLDDMRTRYSGLSPADIFLKLDDTFLWKHQLDLKTIGNKLFHAHSFTFEFQSDFKVKEFGMFPVYTKRIDDNRLTKRRKKN 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04951 1430 Pfam C-JID domain 1308 1417 IPR045344 -
Trre8g04951 1430 SUPERFAMILY L domain-like 1086 1255 - -
Trre8g04951 1430 Gene3D Ribonuclease Inhibitor 949 1141 IPR032675 -
Trre8g04951 1430 Gene3D Ribonuclease Inhibitor 580 767 IPR032675 -
Trre8g04951 1430 Gene3D Ribonuclease Inhibitor 385 579 IPR032675 -
Trre8g04951 1430 Gene3D Ribonuclease Inhibitor 61 220 IPR032675 -
Trre8g04951 1430 Gene3D Ribonuclease Inhibitor 1142 1289 IPR032675 -
Trre8g04951 1430 Gene3D Ribonuclease Inhibitor 235 384 IPR032675 -
Trre8g04951 1430 PANTHER LEUCINE-RICH REPEAT-CONTAINING 864 1044 - -
Trre8g04951 1430 SUPERFAMILY L domain-like 746 1131 - -
Trre8g04951 1430 SUPERFAMILY L domain-like 245 567 - -
Trre8g04951 1430 SUPERFAMILY RNI-like 104 292 - -
Trre8g04951 1430 SUPERFAMILY L domain-like 465 849 - -
Trre8g04951 1430 Gene3D Ribonuclease Inhibitor 768 948 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04951 Trre-Chr8 52475785 52482953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04951 720 996 WRKY Transcription Factor Family AT4G12020 26.596 1.16e-08 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04951 - - tpra:123916959 522.316