Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04943 ATGTCTCATCCAACAACTCCAAAGCATCAGAGACAAAGTTATGCAGATGATTTAGTTAAGCATCATCAACGATTTGGCGGCAAAGTGGATGCGTGGAAGGCTGCTCTAACCCAGGTAGCTGGACTCTCAGGCTGGGATTCACGTGTAACAAGACCTGAAAGCACACTTGTTACAGAGATTGTGAAAGACATTGCGAAAAAATTGAAATGTTGTGTCTCAAGTGATTATGAAGGAATGACAGGAATTGACAACCATATTGAAAATAGGTGCCTTATATCTATTTCAGAAGGTGAAGTTTGGATGCATGATCTAATACGAGATATGGGGCGTCAAATTGTTATGCTTCAATGTGTTGATAATCCTGGAAAACGTAGTCGATTATGGAAGGCTAGTGAAATTGACGATGTTTTAAGCAAGGGAAAGGGAACAGATGCAATCCGGTGTATATTCCTAAACATGGATGAAATATGGGAAAAGAAAGTTCAACTACATGTTGATACATTTAAGAAAATGCATAATCTTAGAATGATCAAGTTCCACAATCCCTTTACGATAAATAAGTCAAATGTAACCTTTCATGGATTCCTGAAGAGTTTTCCTAATGATTTAAAATTTCTTCAATGGGATGGCTACCCTCAAAGATCCTTGCCACAAGACTTTTGCCCAGAAAATCTTGTTACACTTGATATGTCTTATAGCCATCTTGAACAATTTTGGAAGGGGGATCAGGCTTTACCAAGTTTGAAAAGGCTTGACCTTAGTTATTCTAAGAAGCTGATAGCAGTTCCAGACCTCTCTTTCACTCCAAATATTGAAGAAGTAATTCTTAGTGGTTGTGTAAGTTTGACACAAGTTTACTCCTCTGGCTTCCTCAACAATCTTAACTTCTTACTTTTAGAAGGTTGTACCGAACTCAAGAGTTTAAATATTCGTAGCAATATTCTATCAAGATCATCTGGATTAGTTGCTCTCCGTGATTGTCATAAACTTGAAACACTTTTAATCAGCAGTAGAATTGATCATGTGGTTCAATCATATAAAAAATTTTATGGATATTCTAAGGTCGGAGATATGCACAAACTTTGTGATGAAATGGAAATAAAAATAGAGTTGAATGATGAAGGGGATTACGAGATTTGTGGATCATTTTCAGATACTCTTTCAGGAAAAAGAATCAATGATTTTTGTTGGTTAGATATTTCCAAATGTGAGTCCCTATCATGCCTACCAGCTGAACTTTTAAATTTGAAGTTTCTAACAGGACTTTCTCTTCGTGGTTGTTTAAAGTTGGAGTTACCTGAAATCAAGGAGACTATGGAAAATTTAAAAGTGCTCATCTTAGACGAAACATCAATAAAAGAACTACCTTCATCCTTGTACAATTTAGTTGGGCTTGAAAAATTGAGCTTGCAAAGTTGCACAAAGCTTAAGACTATTCCATCTTCCATTGGAAACTTCGGTAAACTCCTCAAGTTAAACCTTACCTATTGTGAATCACTTGAAACTTTTCCGAGCAGCATTTTCAAATTGAAGTTGGCAAAACTCAATTTAGAAGGTTGCTCGATGCTTGCGACCTTTCCAGAGATCTTGGAGCCTGCAGAAAGTTTTACTTGCATTGACTTAACAGACACAGCAATAAAAGAACTACCTTCATCCCTGCACCATTTGGTCGGGCTTAAAGAATTAAGCTTGCAAAGTTGCACAAAGCTTAAGACTATTCCTTCTTCTATTGGAAACCTCAGTAAACTCCTCAAGTTAAAACTTGCCTACTGTGAGTCACTTGAAACTTTTCCGAGCAGCATTTTCAAATTGAAGTTGACAAAACTTGATTTCCAGGGTTGCTCAATGTTCAGGACCTTTCCTGAAATACCAAATGACATTGGCCGCTTGTCATCCTTGACTGAACTTTCATTGAAAGGAAGTAGTATTGTGAACCTTCCTGAGAGTTTGGCTCATCTATCAAGTTTGAAATCACTTAATTTAAGTGATTGCAAATTGCTTGAATGTGTACCAATGCTTCCACTAAATCTAAAGAAAGTTTTTGCATTTGATTGCCCTTCCATTAAGAGAATGATGCTAAATTCAAGGTCTGATTATGAAGAAGATACCTTCAAATTTCATCTGACCAATAGTCAAGAACTAGATGCTACTTGTTTGAGGAATATTGAAGAGGAAGCATATATTAAGATCAACGATGATGCATATAGGTCAGTGATCTTCTGTTTTCCAGGAAGTGCAGTTCCTGATTGGTTCCCTCACCGTTGCCAGGGACATTCAATAACTATAAGAAACAGTCATTTAAAATTATACGGGAGAAACATGCTTATTGGTTTCGCTCTGTGTGTGGTTTTGGGACCTAACTTTCCATACAAATTCTCCTTTTTTGATACTCATTTTACATACGAATTCAAAATTGAATGTGATGGTCAAACACCCTTTCATCCCAACAACAAGCTTGAAGTTGAATATGGTAAGATAAGTTATCGAAGATTGTCCCGACATACGCTATGTTATAGAAGATTTTCCCAACATCACACATTCCTGTGGAAGTATGAATTGGACTTGACAAGAATTGACTTCGAGACTATCACTTTTGAGATGGTAGATGAGCATCGCCGTCCCTTAAGTTTTCCAACAACCATGACAGTGATAGAATGTGGAATGTGTCCTCTGTATAGCAAAGAACCAAGTGGGGATGCAGTGTGTTCGGTAGACCCCTCCTCAAGTGACAACTACACACAATAA 2745 0.3723 MSHPTTPKHQRQSYADDLVKHHQRFGGKVDAWKAALTQVAGLSGWDSRVTRPESTLVTEIVKDIAKKLKCCVSSDYEGMTGIDNHIENRCLISISEGEVWMHDLIRDMGRQIVMLQCVDNPGKRSRLWKASEIDDVLSKGKGTDAIRCIFLNMDEIWEKKVQLHVDTFKKMHNLRMIKFHNPFTINKSNVTFHGFLKSFPNDLKFLQWDGYPQRSLPQDFCPENLVTLDMSYSHLEQFWKGDQALPSLKRLDLSYSKKLIAVPDLSFTPNIEEVILSGCVSLTQVYSSGFLNNLNFLLLEGCTELKSLNIRSNILSRSSGLVALRDCHKLETLLISSRIDHVVQSYKKFYGYSKVGDMHKLCDEMEIKIELNDEGDYEICGSFSDTLSGKRINDFCWLDISKCESLSCLPAELLNLKFLTGLSLRGCLKLELPEIKETMENLKVLILDETSIKELPSSLYNLVGLEKLSLQSCTKLKTIPSSIGNFGKLLKLNLTYCESLETFPSSIFKLKLAKLNLEGCSMLATFPEILEPAESFTCIDLTDTAIKELPSSLHHLVGLKELSLQSCTKLKTIPSSIGNLSKLLKLKLAYCESLETFPSSIFKLKLTKLDFQGCSMFRTFPEIPNDIGRLSSLTELSLKGSSIVNLPESLAHLSSLKSLNLSDCKLLECVPMLPLNLKKVFAFDCPSIKRMMLNSRSDYEEDTFKFHLTNSQELDATCLRNIEEEAYIKINDDAYRSVIFCFPGSAVPDWFPHRCQGHSITIRNSHLKLYGRNMLIGFALCVVLGPNFPYKFSFFDTHFTYEFKIECDGQTPFHPNNKLEVEYGKISYRRLSRHTLCYRRFSQHHTFLWKYELDLTRIDFETITFEMVDEHRRPLSFPTTMTVIECGMCPLYSKEPSGDAVCSVDPSSSDNYTQ 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04943 914 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 356 575 IPR044974 GO:0006952
Trre8g04943 914 Pfam C-JID domain 742 896 IPR045344 -
Trre8g04943 914 SUPERFAMILY L domain-like 392 689 - -
Trre8g04943 914 Gene3D - 2 73 IPR035897 -
Trre8g04943 914 Gene3D Ribonuclease Inhibitor 535 733 IPR032675 -
Trre8g04943 914 Gene3D Ribonuclease Inhibitor 388 534 IPR032675 -
Trre8g04943 914 Gene3D Ribonuclease Inhibitor 145 361 IPR032675 -
Trre8g04943 914 SUPERFAMILY L domain-like 180 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04943 Trre-Chr8 52418080 52423532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04943 488 671 WRKY Transcription Factor Family AT4G12020 29.730 7.40e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04943 - - tpra:123916959 1128.62